PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW29738.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family B3
Protein Properties Length: 311aa    MW: 35878.5 Da    PI: 9.256
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW29738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.47.5e-20401171699
                 EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  ++p kf+++++++  +sk+ +l+ +sg +W v+l   k  + ++lt+GW +Fv+++ L+e +f+vF++dg++ f  +v vf++
  RWW29738.1  40 QRIPPKFLKHISSV--GSKKAILQGPSGSKWHVEL--GKDMKDTFLTAGWPKFVEDHSLREYEFLVFQYDGDMHF--TVLVFDT 117
                 479*****888877..899****************..999999****************************9999..9999986 PP
2B3521.2e-16212296799
                 .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ps v +   +++pk f ++h  +k++   l+l+d+sg+sW v++    +  r+ +++GW+ F++ n+L+egD +v++l+g    el+v++fr+
  RWW29738.1 212 PSQVYRP-YMRIPKWFSRAHLPPKRS--NLVLRDPSGKSWIVTY--IPS-LRCQISRGWSVFARTNNLEEGDYCVLELIG--PIELRVHIFRA 296
                 4555555.49**********544444..7***************..444.46679***********************99..67789*99996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MKTPLCHGRL LVYHCVMEGL MNSQRSDIDQ SICHCFQKLQ RIPPKFLKHI SSVGSKKAIL  60
QGPSGSKWHV ELGKDMKDTF LTAGWPKFVE DHSLREYEFL VFQYDGDMHF TVLVFDTSAC  120
EREDVFAVRP RRQPRQCEGK RKRGRPPKHS PEVGCIVKSE AIEHGMSLEL RKDDVHQPNL  180
LQIQPFQRKL RAEEAANSFT SAFPYIVMRM APSQVYRPYM RIPKWFSRAH LPPKRSNLVL  240
RDPSGKSWIV TYIPSLRCQI SRGWSVFART NNLEEGDYCV LELIGPIELR VHIFRAVEAE  300
ETLEIATTPT A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18000.12e-23B3 family protein