PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW29767.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 432aa MW: 46862.9 Da PI: 8.2822

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW29767.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.9	1.7e-05	16	38	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+sF++ +L H+r+H RWW29767.1 16 HSCKVCGRSFPSGRSLGGHMRSH 38 79********************9 PP
2	zf-C2H2	11.8	0.00076	73	92	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cgk F ++ L H+r RWW29767.1 73 QCKECGKEFLSWRALFGHMR 92 8******************8 PP
3	zf-C2H2	13.3	0.00024	351	373	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C+k Fs+ L H r+H RWW29767.1 351 HRCPICSKFFSSGQALGGHKRSH 373 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MEGDRLAPGL LPLSKHSCKV CGRSFPSGRS LGGHMRSHVN VAAKSFSSDE RRREKPRKTR 60 KRSDSGGGGG EMQCKECGKE FLSWRALFGH MRCHSERPYE ERGERDGSCS NAGHCNSLDN 120 QFGSEAAAAT VSRRMLSKWI RLASVCSSSA CRYEPEDEDG AVSLVLLSRG VRHWSGSCSE 180 SPNKDSEVPE SSDFVSDGSE KKGSELDDSR TEFKKVESDA SDAGIVRDDK NPDCSKQDLS 240 SAVTEPSMKP GFDASGVQLG KNSSSTLERS DGCSDKATKK RSWFECKPCN KVFRSYQALG 300 GHRARHKRMK GCHGHRLHGA DNSMETDGSI NGAAVDETFG RHGSPKSNKG HRCPICSKFF 360 SSGQALGGHK RSHLVANTAY PVVIPHQPFE MSQLLDLNLP ANGSDDYGGR ESTSSTSYCF 420 IHPLTGPVAA DS

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MEGDRLAPGL LPLSKHSCKV CGRSFPSGRS LGGHMRSHVN VAAKSFSSDE RRREKPRKTR  60
KRSDSGGGGG EMQCKECGKE FLSWRALFGH MRCHSERPYE ERGERDGSCS NAGHCNSLDN  120
QFGSEAAAAT VSRRMLSKWI RLASVCSSSA CRYEPEDEDG AVSLVLLSRG VRHWSGSCSE  180
SPNKDSEVPE SSDFVSDGSE KKGSELDDSR TEFKKVESDA SDAGIVRDDK NPDCSKQDLS  240
SAVTEPSMKP GFDASGVQLG KNSSSTLERS DGCSDKATKK RSWFECKPCN KVFRSYQALG  300
GHRARHKRMK GCHGHRLHGA DNSMETDGSI NGAAVDETFG RHGSPKSNKG HRCPICSKFF  360
SSGQALGGHK RSHLVANTAY PVVIPHQPFE MSQLLDLNLP ANGSDDYGGR ESTSSTSYCF  420
IHPLTGPVAA DS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	5e-29	C2H2 family protein