PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW29905.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 80aa    MW: 8981.52 Da    PI: 9.9208
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW29905.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.52.6e-262977250
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                rien   rqvtf+kRr+g+lKKA ELSvLCda++ +iifs +gklye +
  RWW29905.1 29 RIENPVHRQVTFCKRRAGLLKKARELSVLCDADIGIIIFSAHGKLYELA 77
                8*********************************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
MEMSLLTQVD RERAEPELSG ATTSKLLRRI ENPVHRQVTF CKRRAGLLKK ARELSVLCDA  60
DIGIIIFSAH GKLYELATKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.12e-30MIKC_MADS family protein