PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW29932.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 326aa    MW: 34196.8 Da    PI: 9.1765
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW29932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.53.1e-10123148227
                 -S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                 kt+lC+ +     Ck+GdrC+FaHg+
  RWW29932.1 123 KTRLCNKYNTAEGCKFGDRCNFAHGE 148
                 8***********************96 PP
2zf-CCCH33.85.5e-11293318127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 ykt+lC +f + G C++GdrC+FaHg+
  RWW29932.1 293 YKTKLCENFGK-GSCSFGDRCHFAHGE 318
                 9**********.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MPGVREVRRA LAGGEMPTLP VPGRLYDTWR SSSPTTPLTH VTSCGMHGFA NHSADYNMPR  60
HKPIAFTAGC PFGEGCHFLH YVPGGVQAVA QMNNLGNPAL GPPVRNAVAL PAIHDGAPAP  120
AVKTRLCNKY NTAEGCKFGD RCNFAHGEQE LGRPKASSTD GPMAPPMGGR LGGRYEPVHR  180
FEPVPPSTVG AAAASFGVSA TAKISVDASL SGAIIGKGGV NTKQICRLTG AKLSIREHES  240
DPNLKNIELE GSFDQINRAS AMVRELIVNI SATTGLPARN AAPAAATGSR SNYKTKLCEN  300
FGKGSCSFGD RCHFAHGESE LRKASG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06770.12e-49C3H family protein