PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW30021.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 233aa    MW: 26090.8 Da    PI: 8.4861
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW30021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.14e-107899526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                +C+ f++tG C++G +C FaHg
  RWW30021.1 78 PCPEFRQTGACRRGQKCEFAHG 99
                7********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNYENPSLVL PCYLQLSEAA RLAYGVTKAE LDDFLMYEFK VKRCAKAYPH QWMTCPFAHR  60
GEKARRRDPR RFPNHGIPCP EFRQTGACRR GQKCEFAHGV FEFWLHPTRY RTRMCISGPA  120
CRRKICFFAH TVDELRPEGL GEGGGGVPAG VGKLAEGTSA GRPEERGEEF AEPDLRLQRL  180
VCADVDEAST ASTGGSGMWA LLLVYRYSSP RAMPKAISCS VSHPNHTSFL DLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25900.24e-47C3H family protein