PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW30229.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 346aa MW: 38787.3 Da PI: 9.117

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW30229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00089	109	132	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C Cg++F + L++H r H RWW30229.1 109 YLCRVCGRRFFAHAKLVNHFRQiH 132 56*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MALYPCRLRP SCLLPLLRRN RTLATAASSS RAVAVFWDLD NKPPNTIPPY DAAVRLHLAA 60 ASFGPLRFSI AYANHHTFRH LPAPVRAACA ERRAADRLEA ANPSRVPSYL CRVCGRRFFA 120 HAKLVNHFRQ IHEREQEKRL RRIDSATGGR RVRLVAALSL KMEKYKKAAR ELLTPKVGYG 180 LADELRRAGV VVRTVDDRPE AADRALREHM VETMDRGKVG CLVLVSDDSG FLGVMREARI 240 RCLKTVVVGD EGDGVLKRCA DSALSWKDVV SGKAKKEAAS AVGRWKDRDL LKKLEWRHMP 300 EEEENESDVF DDDSDAGDEE DGCLGLVGEG DKKPWWKLDS DSNDLH

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MALYPCRLRP SCLLPLLRRN RTLATAASSS RAVAVFWDLD NKPPNTIPPY DAAVRLHLAA  60
ASFGPLRFSI AYANHHTFRH LPAPVRAACA ERRAADRLEA ANPSRVPSYL CRVCGRRFFA  120
HAKLVNHFRQ IHEREQEKRL RRIDSATGGR RVRLVAALSL KMEKYKKAAR ELLTPKVGYG  180
LADELRRAGV VVRTVDDRPE AADRALREHM VETMDRGKVG CLVLVSDDSG FLGVMREARI  240
RCLKTVVVGD EGDGVLKRCA DSALSWKDVV SGKAKKEAAS AVGRWKDRDL LKKLEWRHMP  300
EEEENESDVF DDDSDAGDEE DGCLGLVGEG DKKPWWKLDS DSNDLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12240.1	1e-107	C2H2 family protein