PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW30418.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 462aa MW: 50746.3 Da PI: 8.6277

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW30418.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0016	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++Fs+ L H+r+H RWW30418.1 4 HRCKLCHRRFSNGRALGGHMRSH 26 79********************9 PP
2	zf-C2H2	10.7	0.0016	199	221	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k F++ L H +H RWW30418.1 199 YQCGTCKKYFRSYQALGGHRASH 221 9***********99999998887 PP
3	zf-C2H2	13.8	0.00017	254	276	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C ++Fs+ L H r+H RWW30418.1 254 FECPYCYRVFSSGQALGGHKRSH 276 89******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MERHRCKLCH RRFSNGRALG GHMRSHVAPA PRPMKPQQHL PSPCASSSSF PAADEDSVAP 60 AATYGLREKS RRRSGLVDPE FSYSIAAAKG AGSGAFPVVQ DGESDTESSF RRRLTRPRRR 120 EDPSADAEPL SSVSDASPDE DVARCLMLLS RDAWSRCEAE GRQSNGCDDA NEDELYFNDG 180 EEETKPQATA RSWRKRTRYQ CGTCKKYFRS YQALGGHRAS HKRVGVECVP IAGIRNRGKD 240 PSDADAADRD PKVFECPYCY RVFSSGQALG GHKRSHFSAA KAVATTTPAR PSPPPPPPHS 300 PFAVNDGFID LNLPAQLEEE AELSALSVAT EPIFEEMLVS LSLTKKNRTG SGISSVRGGR 360 KRKGDASSCC WLFSFLSSSF LHLLLLLSLI MTLLFLPLQS SFHLRLCFGL ALPPCSRRYQ 420 LPNESVSAML VTALSVPAQL PEEQVRWTPC LLVNRHSGVR GE

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MERHRCKLCH RRFSNGRALG GHMRSHVAPA PRPMKPQQHL PSPCASSSSF PAADEDSVAP  60
AATYGLREKS RRRSGLVDPE FSYSIAAAKG AGSGAFPVVQ DGESDTESSF RRRLTRPRRR  120
EDPSADAEPL SSVSDASPDE DVARCLMLLS RDAWSRCEAE GRQSNGCDDA NEDELYFNDG  180
EEETKPQATA RSWRKRTRYQ CGTCKKYFRS YQALGGHRAS HKRVGVECVP IAGIRNRGKD  240
PSDADAADRD PKVFECPYCY RVFSSGQALG GHKRSHFSAA KAVATTTPAR PSPPPPPPHS  300
PFAVNDGFID LNLPAQLEEE AELSALSVAT EPIFEEMLVS LSLTKKNRTG SGISSVRGGR  360
KRKGDASSCC WLFSFLSSSF LHLLLLLSLI MTLLFLPLQS SFHLRLCFGL ALPPCSRRYQ  420
LPNESVSAML VTALSVPAQL PEEQVRWTPC LLVNRHSGVR GE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	4e-34	C2H2 family protein