PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW30437.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 363aa MW: 39873.5 Da PI: 6.9141

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW30437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.4	2.9e-12	82	127	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia+++ gR++ + +rw++ RWW30437.1 82 RGHWRPAEDAKLKELVSQYGPQNWNLIAEKLE-GRSGTHPELRWFNQ 127 899***************************.****99999985 PP
2	Myb_DNA-binding	57.8	2.6e-18	134	177	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++++G++ W++Iar ++ gRt++ +k++w+ RWW30437.1 134 RSAFSEEEEERLLAAHRLYGNK-WALIARLFP-GRTDNAVKNHWHV 177 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MASDVPKSIG DMGLFIPPPP PPPPSPGAME CVGGEQAWGF QSFAVGKDYH EGEQNNSQGE 60 EAEGGDDTTT HESGQQNKLC VRGHWRPAED AKLKELVSQY GPQNWNLIAE KLEGRSGTHP 120 ELRWFNQLDP RINRSAFSEE EEERLLAAHR LYGNKWALIA RLFPGRTDNA VKNHWHVIMA 180 RKHREQSNAY RKRKASSTLP SLGPPPAQAI LPRRMEVNTI IHACSGESTI TSTRDESAST 240 CTDLSLTSFT SRAFPNLLYR SCPTQQPTHP CDISNAKDAK VHPARKGCHD KFGDSGHGFF 300 SGLAPMELVP GVDQAAYSCS TTEASAGGTV VYHRSNAWPQ AEPDHGREKI RIPFIDFLGV 360 GAT

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MASDVPKSIG DMGLFIPPPP PPPPSPGAME CVGGEQAWGF QSFAVGKDYH EGEQNNSQGE  60
EAEGGDDTTT HESGQQNKLC VRGHWRPAED AKLKELVSQY GPQNWNLIAE KLEGRSGTHP  120
ELRWFNQLDP RINRSAFSEE EEERLLAAHR LYGNKWALIA RLFPGRTDNA VKNHWHVIMA  180
RKHREQSNAY RKRKASSTLP SLGPPPAQAI LPRRMEVNTI IHACSGESTI TSTRDESAST  240
CTDLSLTSFT SRAFPNLLYR SCPTQQPTHP CDISNAKDAK VHPARKGCHD KFGDSGHGFF  300
SGLAPMELVP GVDQAAYSCS TTEASAGGTV VYHRSNAWPQ AEPDHGREKI RIPFIDFLGV  360
GAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	8e-66	MYB family protein