PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW30619.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 199aa MW: 22811.6 Da PI: 9.1267

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW30619.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ ++ +G g W+t +r g+ R++k+c++rw +yl RWW30619.1 14 KGAWTKEEDERLIAHIRAHGEGGWRTLPRAAGLQRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	58.8	1.2e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T eEde +++++++lG++ W++Ia++++ gRt++++k++w+++ RWW30619.1 67 RGNFTREEDETIINLHRLLGNR-WSLIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDERLIAHIR AHGEGGWRTL PRAAGLQRCG KSCRLRWINY 60 LRPDLKRGNF TREEDETIIN LHRLLGNRWS LIAARLPGRT DNEIKNYWNT HIRRKLLSRG 120 VDPITHRPID ERAPSTTATS SSERKEEEQQ QQSGGEESSA RRQQEPKCPD LNLELCISPP 180 LRREPSFQLQ LGITDSAAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	8e-85	MYB family protein