PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW30655.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 260aa    MW: 29703.8 Da    PI: 5.2595
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW30655.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF40.43.7e-131159350
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT.SEEEEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst.gklyeys 50
                i ++  r  +f+kR +g+ KKA+E+  LCd++v+vi fss+ +k+  ++
  RWW30655.1 11 IPDTKARRRSFAKRCKGLSKKAYEIHELCDVDVLVISFSSDdDKMVAWP 59
                667788999*****************************98625676665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MGRRNLCFEL IPDTKARRRS FAKRCKGLSK KAYEIHELCD VDVLVISFSS DDDKMVAWPE  60
EPEEVRRIVH RFLTIDKRQR ERWSKSLVQV LEERVMQKTR AKKMPADYAT RVQRLDGRSK  120
DMVADLLRDI DCQISLLKLK IKLLTEKMVV SQQQVDDGGS QTHCPNDNVD EEGMQLCNPA  180
EEDQFHVSEY LSVDLWGDAV ASDHYYVAGP LAASYDSVEM GMANSLLPVQ DFSDGLDWFP  240
SPPADQGGLE LIVRQALARR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18650.12e-10M-type_MADS family protein