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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW30768.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 59aa MW: 6992.21 Da PI: 8.5051 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 17.8 | 9.2e-06 | 3 | 22 | 2 | 21 |
EETTTTEEESSHHHHHHHHH CS
zf-C2H2 2 kCpdCgksFsrksnLkrHir 21
kC++C++ F + n++rHir
RWW30768.1 3 KCEKCSREFCSTINYRRHIR 22
8******************8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 59 aa Download sequence |
MLKCEKCSRE FCSTINYRRH IRDSTKNRML LGAFWDKLPP EEAKEISSLK NVDIEVMMV |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G25610.1 | 2e-15 | C2H2 family protein | ||||




