PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW30931.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 258aa MW: 28909.4 Da PI: 7.2309

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW30931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.2	3.3e-06	26	48	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++Cg++F++ L H+++H RWW30931.1 26 FKCHYCGRTFTSGQALGGHQNSH 48 89*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MSNEDEAGRV GLADQPENKE EEKRTFKCHY CGRTFTSGQA LGGHQNSHRR ERDAAELMQN 60 LWGLCNNHAP VPILPTPSFV PPYYSYMHAV RAQFAPPLLP SPDRPALRPF GYQPNLPPLL 120 PKPDLPMLRP FGYQSHLPPL LPKPNLPMQR SSEHQPHHPP YNFHGYATTT HTSKQPFLAS 180 PYGDHVLTDE ALWRIALQRS YHSRFAGVPS TTRPEMAQAR TEMPSTSTNS SFASKEDLGG 240 STDAKNASDE EIDLTLHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	2e-10	C2H2 family protein