PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW30933.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 319aa MW: 34752.6 Da PI: 8.9914

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW30933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00082	180	202	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C k+F++ L H +H RWW30933.1 180 FQCGMCRKVFRSYQALGGHRASH 202 89**********99999998887 PP
2	zf-C2H2	11.1	0.0013	237	258	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +Cp+C ++F + L H r+H RWW30933.1 237 ECPYCYRVFVSGQALGGHKRSH 258 8*****************9999 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MERHRCKLCF RRFANGRAVA GHMRSHHVVP ARAPRPHPSP SPSASSSSPL AATAAEAEEE 60 VKPSAMYALR ENRRESVFRS AAAAFQDRGS DSESSIRRWP KRRRRLPAEP PAADEPVSSV 120 SDASPDEDVA RCLMLLSRDA WSKCKAEGRH TNGWAEIEGE EYEEEEDGIG SRSRRPRSRF 180 QCGMCRKVFR SYQALGGHRA SHKRAGANCV PTPTGMRIHG EDSSGTTAAH HDAKLWECPY 240 CYRVFVSGQA LGGHKRSHLS SSAAATASTS RALPLLRPPS PFTSAANNDT NSGIDLNLPA 300 PDDEAELSAV SVATESARK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	106	PKRRRRL
2	101	106	KRRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	5e-38	C2H2 family protein