PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW31092.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 537aa MW: 60899.2 Da PI: 10.1305

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW31092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.8	4.1e-19	31	124	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GF +r+++sk + + ++kr++vC + g + ++k+ + k++r+++++r+ C+a++ +kk+ + w v ++++eHnH+l RWW31092.1 31 EYYTNFARKNGFAIRRERSKGNpAHPLGVYKRELVCHRAGVSLPRKTVELKRQRNKKSSRCRCEAQMIIKKNVlkgTTCWIVVHFSNEHNHQLL 124 69***************999766667**************99999999*************99877889***********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MQGAQHITAE ATAVDAPYVG QSFRTDDEAQ EYYTNFARKN GFAIRRERSK GNPAHPLGVY 60 KRELVCHRAG VSLPRKTVEL KRQRNKKSSR CRCEAQMIIK KNVLKGTTCW IVVHFSNEHN 120 HQLLDSEEVR HLPAYRNIPP AVRERILFLS KAGCTVNLMM RALEMERGAK PGHLTFTERD 180 LRNFLQANKG IDRETEGSEL LKACKAMRDK SSDFRYDYTL DANQKLEHIA WSYPDGVHAY 240 KVFGDVVIFD TTYRLYAYDR PFGVWFGVDN YGNLIFLGCV LLQDERPASF RWALQVLMDG 300 KFPQTIMTDL DMGLREAMMS ELPNTKHAFG ICATQIFPGR SISQLPYGQV EVSRPPYRIA 360 VNPRVFIVVI YFTLRFPSRE GYGLAYRQPR ISRAFVWTAQ MLRDAPPCGP LGTAAIFIGF 420 IVLPLSSPLS PRPPFCFSFR FLVGLHIRSR NERARDPRRL RSLEVLLEFV SASRNGASDR 480 AYLARSVNLD LGNLNAVLLR RASRTLCSVS FPRLLSSPKI SIPAFTAGGV YVSAGHS

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MQGAQHITAE ATAVDAPYVG QSFRTDDEAQ EYYTNFARKN GFAIRRERSK GNPAHPLGVY  60
KRELVCHRAG VSLPRKTVEL KRQRNKKSSR CRCEAQMIIK KNVLKGTTCW IVVHFSNEHN  120
HQLLDSEEVR HLPAYRNIPP AVRERILFLS KAGCTVNLMM RALEMERGAK PGHLTFTERD  180
LRNFLQANKG IDRETEGSEL LKACKAMRDK SSDFRYDYTL DANQKLEHIA WSYPDGVHAY  240
KVFGDVVIFD TTYRLYAYDR PFGVWFGVDN YGNLIFLGCV LLQDERPASF RWALQVLMDG  300
KFPQTIMTDL DMGLREAMMS ELPNTKHAFG ICATQIFPGR SISQLPYGQV EVSRPPYRIA  360
VNPRVFIVVI YFTLRFPSRE GYGLAYRQPR ISRAFVWTAQ MLRDAPPCGP LGTAAIFIGF  420
IVLPLSSPLS PRPPFCFSFR FLVGLHIRSR NERARDPRRL RSLEVLLEFV SASRNGASDR  480
AYLARSVNLD LGNLNAVLLR RASRTLCSVS FPRLLSSPKI SIPAFTAGGV YVSAGHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-108	FAR1 family protein