PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW31102.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 352aa MW: 40469.1 Da PI: 4.8011

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW31102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.1	2.2e-36	44	135	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sws+++nsfvv+d+ fa +LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ik RWW31102.1 44 FLTKTYDMVDDPSTNQVVSWSQTNNSFVVWDPYAFAMMLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKTIK 131 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r++ RWW31102.1 132 RRRP 135 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MNPVLNPVKE EYQDYSEVSS GSNEVVVDPP RPLEGLHEAG PPPFLTKTYD MVDDPSTNQV 60 VSWSQTNNSF VVWDPYAFAM MLLPKYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL 120 RGQKHLLKTI KRRRPHNHPP QQSLSSYVEV GEFGLERGVD RLKRDRHLLM QEVVKLRQEQ 180 QNTRANLKAM EERLQLTEQK QQQTMAFLAR LMQNPNLLQQ LLDQKERMKE LEEAISRKRR 240 RPIDTAPEPD DVGTSGDQKT YLPVKIEAQG TQNFYVEEVL SSDNLAGQSH SEECLPPDEN 300 NTDGELNDNF WEELLNEGLG DEKGTFGFEG VHSEDVNVLA DQLGFLSSTS PK

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MNPVLNPVKE EYQDYSEVSS GSNEVVVDPP RPLEGLHEAG PPPFLTKTYD MVDDPSTNQV  60
VSWSQTNNSF VVWDPYAFAM MLLPKYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL  120
RGQKHLLKTI KRRRPHNHPP QQSLSSYVEV GEFGLERGVD RLKRDRHLLM QEVVKLRQEQ  180
QNTRANLKAM EERLQLTEQK QQQTMAFLAR LMQNPNLLQQ LLDQKERMKE LEEAISRKRR  240
RPIDTAPEPD DVGTSGDQKT YLPVKIEAQG TQNFYVEEVL SSDNLAGQSH SEECLPPDEN  300
NTDGELNDNF WEELLNEGLG DEKGTFGFEG VHSEDVNVLA DQLGFLSSTS PK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	133	LKTIKRR
2	237	241	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-102	HSF family protein