PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW31173.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 116aa    MW: 13388.7 Da    PI: 10.815
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW31173.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF60.81.6e-19952144
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                kr +n+  rqvt+skR++g+ KKA+ELS+LCd++  + +f+++g
  RWW31173.1  9 KRLDNSNSRQVTYSKRKTGVTKKAKELSILCDIDLVLFMFAPNG 52
                6889**************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MGRVKLKIKR LDNSNSRQVT YSKRKTGVTK KAKELSILCD IDLVLFMFAP NGMPTICVGD  60
RSRNTEEVVA RFAQVSQQER EKRHARILIG FKCALKKTFK KLDHNVDIQE FLGSRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.15e-41M-type_MADS family protein