PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW31259.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 564aa MW: 63354.6 Da PI: 9.6309

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW31259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.4	2e-22	82	173	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrng..eitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn+YA ++GF +r+++s++++r+g +++++fvC keg+++++ ++ +k++r+r + r gC a+++v ++ +kw+vtkl leH+H ++ RWW31259.1 82 FYNAYALRLGFGIRVARSRSERRKGveVMVMKRFVCLKEGHHKKKVTEnGTKKKRKRLSIRDGCPAMMEVVRRGPEKWVVTKLLLEHTHMVV 173 9***********99999886665226889******9999877468889999******************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MEHSSSEDDE LVEDYLDFED DIKASDVNHQ DEEATASVAS SNMVLVEQAI GNELLAADDG 60 DAKNQVPCLG MEFESDTVAR AFYNAYALRL GFGIRVARSR SERRKGVEVM VMKRFVCLKE 120 GHHKKKVTEN GTKKKRKRLS IRDGCPAMME VVRRGPEKWV VTKLLLEHTH MVVSPERVRE 180 IQLTDIYTRT VFEKFQAELV EALNHYAVKI QDGSMSKYSV GRDGDAHNRH IVFFDEPEKK 240 AYCSCYKYEV SGILCRHVLG LFLACGTILL PEHCILKRWT KKAKSGLVGH ESDLEVQNYS 300 QDSPILWYND LLHYTMKFAE RGATSSEAYK IAKDMLQKVF AQIISYEENV AEGMPHHVGK 360 LYHPIRAVHT GPSVFRYADR PLLDGTAKNR PSAVDFGGRR PTEGESTVGS RLREIGEKGK 420 KKKKRKRRRG EETKPLLSPP TGRPRPVVAH GSPAPRRRPH PRAIFLPREE KDRGDIRRCM 480 FVLLQTRDIV IEKAFVARRS HVSFALIRTK KQAIGLSSSR SAAHQVACPP GSTGLVSLVT 540 PPPETPADGI RRAGPGPADE VLLG

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MEHSSSEDDE LVEDYLDFED DIKASDVNHQ DEEATASVAS SNMVLVEQAI GNELLAADDG  60
DAKNQVPCLG MEFESDTVAR AFYNAYALRL GFGIRVARSR SERRKGVEVM VMKRFVCLKE  120
GHHKKKVTEN GTKKKRKRLS IRDGCPAMME VVRRGPEKWV VTKLLLEHTH MVVSPERVRE  180
IQLTDIYTRT VFEKFQAELV EALNHYAVKI QDGSMSKYSV GRDGDAHNRH IVFFDEPEKK  240
AYCSCYKYEV SGILCRHVLG LFLACGTILL PEHCILKRWT KKAKSGLVGH ESDLEVQNYS  300
QDSPILWYND LLHYTMKFAE RGATSSEAYK IAKDMLQKVF AQIISYEENV AEGMPHHVGK  360
LYHPIRAVHT GPSVFRYADR PLLDGTAKNR PSAVDFGGRR PTEGESTVGS RLREIGEKGK  420
KKKKRKRRRG EETKPLLSPP TGRPRPVVAH GSPAPRRRPH PRAIFLPREE KDRGDIRRCM  480
FVLLQTRDIV IEKAFVARRS HVSFALIRTK KQAIGLSSSR SAAHQVACPP GSTGLVSLVT  540
PPPETPADGI RRAGPGPADE VLLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	138	KKKVTENGTKKKRKR
2	420	426	KKKKKRK
3	420	428	KKKKKRKRR
4	421	427	KKKKKRK
5	421	429	KKKKKRKRR
6	421	426	KKKKRK
7	422	428	KKKKKRK
8	423	429	KKKKKRK
9	423	428	KKRKRR
10	424	429	KRKRRR
11	425	429	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	3e-32	FAR1 family protein