PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW31386.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 343aa MW: 39741.2 Da PI: 4.652

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW31386.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.8	4.1e-34	41	132	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++e++ed+e++ ++sws + nsf+v+d+++fa+ +LpkyFkhsnf+SF+RQLn+YgF+kv+ ++ weF+ F +g+++ll++ik RWW31386.1 41 FLTKTFEMVEDAETDAVVSWSGTRNSFIVWDSHRFATALLPKYFKHSNFSSFIRQLNTYGFRKVDPNR---------WEFASADFLAGQRHLLKNIK 128 9******************999************************************9998.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ RWW31386.1 129 RRRN 132 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MENAAAVVKE EEEEEEEEEE EEVMAAPQPM EWLHEVGPPP FLTKTFEMVE DAETDAVVSW 60 SGTRNSFIVW DSHRFATALL PKYFKHSNFS SFIRQLNTYG FRKVDPNRWE FASADFLAGQ 120 RHLLKNIKRR RNVPQSPHQH HGDDARDQPG MFGLETEVDR MRRDRNELML EIVKLRQRQQ 180 RSRAQLLEMQ RRMQAAERRQ QQTMSFLGRA LRNPAFVRQL VLRGEQQRQL RGAGKKRRLP 240 ANPSSEDFPA IEDLLLSTMD DDEGSSNDTG QRDESTVEQG ASVTNDLTWE ELLNESKFIG 300 GETENEEQSE VEVEVEALAA EQLEWGDDMK DLVKQMGYMK SKP

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MENAAAVVKE EEEEEEEEEE EEVMAAPQPM EWLHEVGPPP FLTKTFEMVE DAETDAVVSW  60
SGTRNSFIVW DSHRFATALL PKYFKHSNFS SFIRQLNTYG FRKVDPNRWE FASADFLAGQ  120
RHLLKNIKRR RNVPQSPHQH HGDDARDQPG MFGLETEVDR MRRDRNELML EIVKLRQRQQ  180
RSRAQLLEMQ RRMQAAERRQ QQTMSFLGRA LRNPAFVRQL VLRGEQQRQL RGAGKKRRLP  240
ANPSSEDFPA IEDLLLSTMD DDEGSSNDTG QRDESTVEQG ASVTNDLTWE ELLNESKFIG  300
GETENEEQSE VEVEVEALAA EQLEWGDDMK DLVKQMGYMK SKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	130	LKNIKRR
2	160	165	RMRRDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-79	HSF family protein