PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW31389.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 397aa MW: 43911.5 Da PI: 9.5919

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW31389.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.6	1.1e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RWW31389.1 6 FVCEICNKGFQRDQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	10.7	0.0017	81	103	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H + + RWW31389.1 81 WKCERCSKKYAVQSDWKAHSKIC 103 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRPKE MRKKVYICPE VTCVHHDPSR 60 ALGDLTGIKK HFSRKHGEKK WKCERCSKKY AVQSDWKAHS KICGTREYRC DCGTLFSRRD 120 SFITHRAFCD ALAEESSRGI PANPMVNHHP LQFSHPSTSL DTLPLQQTVM LKTQFPHLMR 180 STEVSHELKR EQHFDVRSDT SPWFRAATSL DHLAHSSSVY SSRLEQEYPH DNPSDAPPLP 240 PPTYQVPASS PHMSATALLQ KAAQMGATVS RPPHIGHMAT HTTHSSFMAP PASGFGLGLS 300 SQRDTSGAGG GGSFEQASAA SPLLQDMMMN PRPSTPGFNG SFADAFGGIL GSKRQGNDFM 360 DGAVRSQART DVGGGGGNDG MTRDFLGLRA FFPQGYP

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRPKE MRKKVYICPE VTCVHHDPSR  60
ALGDLTGIKK HFSRKHGEKK WKCERCSKKY AVQSDWKAHS KICGTREYRC DCGTLFSRRD  120
SFITHRAFCD ALAEESSRGI PANPMVNHHP LQFSHPSTSL DTLPLQQTVM LKTQFPHLMR  180
STEVSHELKR EQHFDVRSDT SPWFRAATSL DHLAHSSSVY SSRLEQEYPH DNPSDAPPLP  240
PPTYQVPASS PHMSATALLQ KAAQMGATVS RPPHIGHMAT HTTHSSFMAP PASGFGLGLS  300
SQRDTSGAGG GGSFEQASAA SPLLQDMMMN PRPSTPGFNG SFADAFGGIL GSKRQGNDFM  360
DGAVRSQART DVGGGGGNDG MTRDFLGLRA FFPQGYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	44	KLKQRPKEMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-100	C2H2 family protein