PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW31532.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MIKC_MADS

Protein Properties

Length: 191aa MW: 21756.3 Da PI: 9.5706

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW31532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.7	3.1e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtfskRrngi+KKA E+S+LCda v+v+ifss+gk+ y++ RWW31532.1 9 KRIENSTNRQVTFSKRRNGIIKKAREISILCDAHVSVVIFSSSGKMSNYCT 59 79***********************************************96 PP
2	K-box	31.8	6.2e-12	112	147	35	70
K-box 35 qRhllGedLesLslkeLqqLeqqLekslkkiRskKn 70 +Rhl+GedL+sL keL +e++L+ +l ++R+k++ RWW31532.1 112 IRHLKGEDLNSLYPKELIPIEEALQIGLASVRDKQM 147 7********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MGRGKIEIKR IENSTNRQVT FSKRRNGIIK KAREISILCD AHVSVVIFSS SGKMSNYCTP 60 TTALSAEIDR VKKENDNMQI ELRFVMPLYV SSYWFAYSVL WSFVVKHGVG MIRHLKGEDL 120 NSLYPKELIP IEEALQIGLA SVRDKQMIFS FQIPSAGYIR CTDYIVDVAL SRQHFLQGIL 180 DAQVIMTETK S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	1e-43	MIKC_MADS family protein