PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW31690.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 197aa    MW: 22477.7 Da    PI: 8.3959
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW31690.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.61.8e-292370148
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                krien++nrqvtf+kRrng+lKKA+ELSvLCda+va+i+fs++g+lye
  RWW31690.1 23 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDADVALIVFSTRGRLYE 70
                79*********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
SDEEEPATLE PPARMGRGKI EIKRIENTTN RQVTFCKRRN GLLKKAYELS VLCDADVALI  60
VFSTRGRLYE SEEGSQEDRR ERERECVCIA GWRAPRCVDK RGEGGIYTGS KGSEDLRELR  120
EGKRPIMSWD REQTWQRRTN GILEETKVGG KVCVCKKTGA KMGPWKSEHP LLLFDLPVFC  180
NVVVHVGLPF TFEKMGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.31e-33MIKC_MADS family protein