PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW31748.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 807aa MW: 87418.8 Da PI: 7.9748

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW31748.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.6	5.7e-12	73	108	1	36
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevsk 36 rW++qe+laL+++r++m++++r++ lk+plWeevs+ RWW31748.1 73 RWPRQETLALLQIRSDMDSAFRDATLKGPLWEEVSR 108 8**********************************8 PP
2	trihelix	45.3	2.3e-14	244	293	36	87
trihelix 36 kkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +k++e g++rs+k+Ckek+en++k+yk++k+g+ +r++++s +++f+qlea RWW31748.1 244 RKLAELGYTRSAKKCKEKFENVHKYYKRTKDGRAGRQDGKS--YRFFSQLEA 293 6889*****************************866665..*****85 PP
3	trihelix	103.8	1.3e-32	577	662	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+ +++++ + k+plWee+s+ m++ g++rs+k+Ckekwen+nk++kk+k+++k r +++s+tcpyf+ql+a RWW31748.1 577 RWPKAEVHALINLRSGLDSKYHEVGPKGPLWEEISAGMQHLGYNRSSKRCKEKWENINKYFKKVKDSNKHR-PDDSKTCPYFHQLDA 662 8******************************************************************86.9**********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 807 aa Download sequence
MTQFSTAPPG SRAHLLGIPG PEPFQDPPLA EAPSPLSSRP PAANFDELAR GAAGGNLPED 60 DGEGGGSGAT GNRWPRQETL ALLQIRSDMD SAFRDATLKG PLWEEVSRDQ VTIWRGVRTT 120 DSTATMVAAA ELPFLGERNK SSPLFFEHLR SLPLVPQFPD AKSCFPRGRL IAINFLLSPS 180 SSPASLGEFG VCGCGWRSSC NHDRVIFLAF IAGGVVAAAV LSLRPDPFIL VPRAGHNCCY 240 LVYRKLAELG YTRSAKKCKE KFENVHKYYK RTKDGRAGRQ DGKSYRFFSQ LEALHGGSSG 300 GGGGATGMAG PPASRAQPIS AVAPSTLTVP TRAVVPEPTP PLGPQGISSS TALGISFSSN 360 SSSSASSGSD DEDTEEAGES QEGRKRKRGG GDSGSSRKMM GFFDRLLKQV MERQEAMQQR 420 FLDAIEKREQ DRMIRDEAWR RQEMTRLNRE QELLAQERAM AASRDTAIIS YLQKLSGQTI 480 PMPTMPATPV SHAPSPQSAA PPRKPQPPPP PPITQQQQQR PPASVQSPSK QLVVQSHNHI 540 TEMARHQSSS GTELVPYTEP QDTEDGANLE PVSSSSRWPK AEVHALINLR SGLDSKYHEV 600 GPKGPLWEEI SAGMQHLGYN RSSKRCKEKW ENINKYFKKV KDSNKHRPDD SKTCPYFHQL 660 DALYRNRLVG SGSNVGTQRQ EGQEVNPASD QQQSGAPMNL SSPPPLHQPA AEAESKKEKN 720 CSNNSGCDVN SEGGGGSNAI QVQTGNGGLP SSFFDEGLQK VSAAPPLSLP RNLCIFAGDI 780 ITWWIDVRIE DRSHCEGADG ATTICDQ

Sequence ? help Back to Top

Protein Sequence Length: 807 aa Download sequence

MTQFSTAPPG SRAHLLGIPG PEPFQDPPLA EAPSPLSSRP PAANFDELAR GAAGGNLPED  60
DGEGGGSGAT GNRWPRQETL ALLQIRSDMD SAFRDATLKG PLWEEVSRDQ VTIWRGVRTT  120
DSTATMVAAA ELPFLGERNK SSPLFFEHLR SLPLVPQFPD AKSCFPRGRL IAINFLLSPS  180
SSPASLGEFG VCGCGWRSSC NHDRVIFLAF IAGGVVAAAV LSLRPDPFIL VPRAGHNCCY  240
LVYRKLAELG YTRSAKKCKE KFENVHKYYK RTKDGRAGRQ DGKSYRFFSQ LEALHGGSSG  300
GGGGATGMAG PPASRAQPIS AVAPSTLTVP TRAVVPEPTP PLGPQGISSS TALGISFSSN  360
SSSSASSGSD DEDTEEAGES QEGRKRKRGG GDSGSSRKMM GFFDRLLKQV MERQEAMQQR  420
FLDAIEKREQ DRMIRDEAWR RQEMTRLNRE QELLAQERAM AASRDTAIIS YLQKLSGQTI  480
PMPTMPATPV SHAPSPQSAA PPRKPQPPPP PPITQQQQQR PPASVQSPSK QLVVQSHNHI  540
TEMARHQSSS GTELVPYTEP QDTEDGANLE PVSSSSRWPK AEVHALINLR SGLDSKYHEV  600
GPKGPLWEEI SAGMQHLGYN RSSKRCKEKW ENINKYFKKV KDSNKHRPDD SKTCPYFHQL  660
DALYRNRLVG SGSNVGTQRQ EGQEVNPASD QQQSGAPMNL SSPPPLHQPA AEAESKKEKN  720
CSNNSGCDVN SEGGGGSNAI QVQTGNGGLP SSFFDEGLQK VSAAPPLSLP RNLCIFAGDI  780
ITWWIDVRIE DRSHCEGADG ATTICDQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	383	389	GRKRKRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	4e-48	Trihelix family protein