PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW31789.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GRAS

Protein Properties

Length: 1035aa MW: 113289 Da PI: 7.4355

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW31789.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.3e-05	202	224	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ Cg+ F +++L+ H t H RWW31789.1 202 TCHRCGEKFAKWETLEAHHLTkH 224 7*****************99988 PP
2	GRAS	418.3	6.7e-128	666	1034	2	373
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 ++lL++cAe +s+++ ++ + l+++ + +s +g p+qRl ay++e+L ar +s++++y+al+++e + s+e l++++++++++P++kf++++a RWW31789.1 666 KSLLIKCAETLSENKIKEFELLVEEAQSVVSITGAPIQRLGAYMLEGLVARHKSSGTNIYRALRCREPD---SKELLSYMRILYDICPYFKFGYMAA 759 689***************************************************************9...9******************** PP GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlelee 193 N aI +a+++e+r+HiiDf+i qG+QW++L+qaLa+Rp+gpp++RiTg+++p ++ + + l+ +++ L ++ +++++p+ef+ l ++++ e+ RWW31789.1 760 NGAIADALKNEDRIHIIDFQIAQGAQWVTLIQALAARPGGPPHVRITGIDDPVAEhaRGDGLHVVEKMLLDMSKKFNIPLEFKGL-PVYGAEVTKEM 855 ***********************************************99888899*********************6.7789999 PP GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290 L+v+ gEalaVn++lqlh+++desv+++++rd +L+lvk+lsPkv+++veqe+++n+++Fl rf+++l+yysa+f+s+++ lp+e+++ri+vE+++l RWW31789.1 856 LDVRLGEALAVNFALQLHHTPDESVDVKNPRDGLLRLVKGLSPKVMTLVEQESNTNTTPFLSRFVKTLDYYSAMFESVDVMLPKENKDRINVEQHCL 952 ********************************************************************************************* PP GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 +++ivn++aceg++r+erhe l+kWr+rl++aGF+p+pls ++++ +k+ll +++++ y++ e++g+l+lgWk+r+Lvs+SaW RWW31789.1 953 AKDIVNIIACEGKDRIERHELLGKWRSRLSMAGFRPYPLSPYVNSVIKALLGNYSEK-YTLMEKDGALLLGWKNRNLVSASAW 1034 ***************************************************65.*********************** PP

Sequence ? help Back to Top
Protein Sequence Length: 1035 aa Download sequence
MPTVWIALKR SLHCKSEPSE VHDPKARGHL GSILTRKAAR SGCSRSIANL RDVIHGSKRH 60 IEKPPSCSPR SIGSSEFLNP IAHEVILNNS RCELRITGSG ACHEGEAGLD SPCVGTLRPG 120 TPGPGCHPSP LRYNPPPCGG GASSTPARKC PSFSGDREEH GSGGSSLATV LLGHGVVGLH 180 PAASTPRFSH EVHLHKCSAA VTCHRCGEKF AKWETLEAHH LTKHAVSELV EGDSPRKIVE 240 MICRTGWSKT DGSCGRIERV LKVHNMQKTL AHFEEYRETV KMKASKLPKK HPRCLADGNE 300 LLRFHGTTIA CSLGMNGSSG LCASEKCSVC QIIRHGFSGN EGTKGGIGVF TTSTSGRALE 360 SIETDEDDSG VKKALLVCRV IAGRVHKPLD NYQELVVQVQ FSKVELALAN SYCLQRTPLP 420 ADSNPLSAAV PKLADFVDAN SGDADSVDAL DLNYISCIVD AHLSSMDSHQ LYGLTGADLS 480 CEYPSPRNLM VTEWTLDSTK SALGNSPNSP LSSQFECDKS VPSNIQDQHS STDTIPGVSL 540 SGHSPLDTDS GFKPSQVHLP EGIQIQSNSL SAASSQSMRH ALQEIETALM APDTEEPTTS 600 TDPELSENKQ TQLPKQRSRT WTHEIRLESP LVHPCYRSGG DLNPSHEVRP EKRLREMRKP 660 SGNDVKSLLI KCAETLSENK IKEFELLVEE AQSVVSITGA PIQRLGAYML EGLVARHKSS 720 GTNIYRALRC REPDSKELLS YMRILYDICP YFKFGYMAAN GAIADALKNE DRIHIIDFQI 780 AQGAQWVTLI QALAARPGGP PHVRITGIDD PVAEHARGDG LHVVEKMLLD MSKKFNIPLE 840 FKGLPVYGAE VTKEMLDVRL GEALAVNFAL QLHHTPDESV DVKNPRDGLL RLVKGLSPKV 900 MTLVEQESNT NTTPFLSRFV KTLDYYSAMF ESVDVMLPKE NKDRINVEQH CLAKDIVNII 960 ACEGKDRIER HELLGKWRSR LSMAGFRPYP LSPYVNSVIK ALLGNYSEKY TLMEKDGALL 1020 LGWKNRNLVS ASAWH

Sequence ? help Back to Top

Protein Sequence Length: 1035 aa Download sequence

MPTVWIALKR SLHCKSEPSE VHDPKARGHL GSILTRKAAR SGCSRSIANL RDVIHGSKRH  60
IEKPPSCSPR SIGSSEFLNP IAHEVILNNS RCELRITGSG ACHEGEAGLD SPCVGTLRPG  120
TPGPGCHPSP LRYNPPPCGG GASSTPARKC PSFSGDREEH GSGGSSLATV LLGHGVVGLH  180
PAASTPRFSH EVHLHKCSAA VTCHRCGEKF AKWETLEAHH LTKHAVSELV EGDSPRKIVE  240
MICRTGWSKT DGSCGRIERV LKVHNMQKTL AHFEEYRETV KMKASKLPKK HPRCLADGNE  300
LLRFHGTTIA CSLGMNGSSG LCASEKCSVC QIIRHGFSGN EGTKGGIGVF TTSTSGRALE  360
SIETDEDDSG VKKALLVCRV IAGRVHKPLD NYQELVVQVQ FSKVELALAN SYCLQRTPLP  420
ADSNPLSAAV PKLADFVDAN SGDADSVDAL DLNYISCIVD AHLSSMDSHQ LYGLTGADLS  480
CEYPSPRNLM VTEWTLDSTK SALGNSPNSP LSSQFECDKS VPSNIQDQHS STDTIPGVSL  540
SGHSPLDTDS GFKPSQVHLP EGIQIQSNSL SAASSQSMRH ALQEIETALM APDTEEPTTS  600
TDPELSENKQ TQLPKQRSRT WTHEIRLESP LVHPCYRSGG DLNPSHEVRP EKRLREMRKP  660
SGNDVKSLLI KCAETLSENK IKEFELLVEE AQSVVSITGA PIQRLGAYML EGLVARHKSS  720
GTNIYRALRC REPDSKELLS YMRILYDICP YFKFGYMAAN GAIADALKNE DRIHIIDFQI  780
AQGAQWVTLI QALAARPGGP PHVRITGIDD PVAEHARGDG LHVVEKMLLD MSKKFNIPLE  840
FKGLPVYGAE VTKEMLDVRL GEALAVNFAL QLHHTPDESV DVKNPRDGLL RLVKGLSPKV  900
MTLVEQESNT NTTPFLSRFV KTLDYYSAMF ESVDVMLPKE NKDRINVEQH CLAKDIVNII  960
ACEGKDRIER HELLGKWRSR LSMAGFRPYP LSPYVNSVIK ALLGNYSEKY TLMEKDGALL  1020
LGWKNRNLVS ASAWH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48150.1	1e-173	GRAS family protein