PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32003.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 429aa MW: 49629.5 Da PI: 7.7846

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.1	5.5e-27	11	98	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA++ GF vr+s+s+ s +n itkrtfvCs+eg+re++k + ++ + +ra+tr+gC a+++++++ +gk++vt+++ +HnH+la RWW32003.1 11 EFYNTYAENEGFIVRRSSSTVSAKNI-ITKRTFVCSREGFREKKKGE-REVKCPRAVTRIGCPACMTIRLTPTGKYCVTEFVPNHNHQLA 98 6***************99996666.************9999.99999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MLFDSESDAY EFYNTYAENE GFIVRRSSST VSAKNIITKR TFVCSREGFR EKKKGEREVK 60 CPRAVTRIGC PACMTIRLTP TGKYCVTEFV PNHNHQLATV ATFDKLRAKK LRRNARVARA 120 GLVDDTVRIP EFETEDEAYE FYNNKWVAKL FEEREKWALV YGRETFYADM KSVQQKESIS 180 TELKKYLGNG RELPSFFEHY ERILSQRRHA ELQDDFDANQ STQKPPSMRM LRQAANAYTP 240 AAYRMFEREF ELYMDCILLS CNEFGTLSEY KVMVEEKPKV HVVKCDTLDS SMSCSCKKFE 300 FLGIQCCHVL KVLDTQNIKE LPPQYILKRW RKDAKTRNLN EDFAFPFDGD PQLSLANRHS 360 YLCRIFSIAA AHAAKTIDSY TFLESHSEAL SNQLEQVLHT SSLEMPAVIS ASCDRLQNPV 420 ETVVTESVR

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MLFDSESDAY EFYNTYAENE GFIVRRSSST VSAKNIITKR TFVCSREGFR EKKKGEREVK  60
CPRAVTRIGC PACMTIRLTP TGKYCVTEFV PNHNHQLATV ATFDKLRAKK LRRNARVARA  120
GLVDDTVRIP EFETEDEAYE FYNNKWVAKL FEEREKWALV YGRETFYADM KSVQQKESIS  180
TELKKYLGNG RELPSFFEHY ERILSQRRHA ELQDDFDANQ STQKPPSMRM LRQAANAYTP  240
AAYRMFEREF ELYMDCILLS CNEFGTLSEY KVMVEEKPKV HVVKCDTLDS SMSCSCKKFE  300
FLGIQCCHVL KVLDTQNIKE LPPQYILKRW RKDAKTRNLN EDFAFPFDGD PQLSLANRHS  360
YLCRIFSIAA AHAAKTIDSY TFLESHSEAL SNQLEQVLHT SSLEMPAVIS ASCDRLQNPV  420
ETVVTESVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-34	FAR1 family protein