PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32109.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 237aa MW: 26181.9 Da PI: 7.011

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	63.3	6.1e-20	41	88	1	48
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllka 48 +CaaCk+lrr+Ca++Cvlapyfp ++p kf +h++FGasnv+kll+ RWW32109.1 41 PCAACKILRRRCADNCVLAPYFPPTEPLKFTTAHRVFGASNVIKLLQV 88 7********************************************985 PP
2	DUF260	56.8	6.5e-18	116	175	41	100
DUF260 41 nvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 n ++ ++lpe++r da+ss+vyeA+ar+rdPvyG+++ + +lq+q+++l+a+la++k+e RWW32109.1 116 NWIRHTQDLPENQRADAVSSMVYEAKARIRDPVYGCTAAVCQLQKQVDELQAQLARAKAE 175 6678899************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MDSSDTTTTG FHHVSSSPSS SPISSPPYLP ATPTTVVIHS PCAACKILRR RCADNCVLAP 60 YFPPTEPLKF TTAHRVFGAS NVIKLLQVNC RRLSLPHKHH AEVSFCLYVY VLLHFNWIRH 120 TQDLPENQRA DAVSSMVYEA KARIRDPVYG CTAAVCQLQK QVDELQAQLA RAKAELTNLQ 180 AQHGNLLALI CMEMARTQQD CAPQFVSGAL AASPCMFQSD ADFVDEISQG LVWDEPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	1e-56	LBD family protein