PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32139.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 380aa MW: 42009.8 Da PI: 9.4515

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C k F r nL+ H r H RWW32139.1 6 FVCEVCRKGFQRDQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	11.4	0.001	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + RWW32139.1 83 WKCDNCSKKYAVQSDWKAHSKIC 105 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MATNRFVCEV CRKGFQRDQN LQLHRRGHNL PWKLRQRNGG SEARKKVYVC PEPTCVHHNP 60 GRALGDLTGI KKHYCRKHGE KKWKCDNCSK KYAVQSDWKA HSKICGTRQY KCECGTIFSR 120 SAVSCSFPII YRRDSFMTHR AFCDALAQEN KKLSQPLMAT MASSLQGQAP PSLVMPIQHT 180 SNTSSSTTVP EFSYDMNNPP AIDALAASLA SRDMAGGMFP SFLSPVSFDG LLEAKMPRPM 240 AVSAHASATS LLQNAAQIGA TQRSMASVMA GRPYQVTSTH GGGSASLFYA SSVRETGDGS 300 LNEMIARCGS GDVMTVDFLG VGGQRRPHMQ QQQQRERHNM EFGGVLLRTG MEITHPLQLQ 360 QQQQMAYGSS NEPENLIWDI

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MATNRFVCEV CRKGFQRDQN LQLHRRGHNL PWKLRQRNGG SEARKKVYVC PEPTCVHHNP  60
GRALGDLTGI KKHYCRKHGE KKWKCDNCSK KYAVQSDWKA HSKICGTRQY KCECGTIFSR  120
SAVSCSFPII YRRDSFMTHR AFCDALAQEN KKLSQPLMAT MASSLQGQAP PSLVMPIQHT  180
SNTSSSTTVP EFSYDMNNPP AIDALAASLA SRDMAGGMFP SFLSPVSFDG LLEAKMPRPM  240
AVSAHASATS LLQNAAQIGA TQRSMASVMA GRPYQVTSTH GGGSASLFYA SSVRETGDGS  300
LNEMIARCGS GDVMTVDFLG VGGQRRPHMQ QQQQRERHNM EFGGVLLRTG MEITHPLQLQ  360
QQQQMAYGSS NEPENLIWDI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	46	KLRQRNGGSEARKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	3e-87	C2H2 family protein