PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32328.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 384aa MW: 43840.1 Da PI: 9.2988

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.0003	311	327	1	17
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 + C+ C+k+F+r nL+ RWW32328.1 311 FACSVCNKTFNRYNNLQ 327 78************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MSSPREACTR RRNVPVKPQQ EARKKQCRFF SPRNLDDVTE ASHPRFFSPR SPKLILPTKP 60 RRGFFSLWRW SKSTITERFR VVMGWKQPQL MVPPVLTSPD IFHYIVQTDE ANMVSWRLID 120 NVSIAISISL HIDMRIEDAL IEASERWKRV CENTATEFSW KMGLRDYPMD ESSIGFYFQS 180 PPFYQWLKTP PSSSSASSSS SSSSRSSSSS SYSSPPQQDQ EMVLQQDHLP SQGLRCLPLL 240 SRLEEAGKHI KEGHKGDRDD VGTEEKRRLM CKKEVHRKEA SEESVRSSCS GSESRYWIPT 300 ATQILIGLEK FACSVCNKTF NRYNNLQVSL SLSLSLLLLL PHLLMFPSAS SSLLSSGMAL 360 LFPHTSCLFL RVHGTEHTNE CILR

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MSSPREACTR RRNVPVKPQQ EARKKQCRFF SPRNLDDVTE ASHPRFFSPR SPKLILPTKP  60
RRGFFSLWRW SKSTITERFR VVMGWKQPQL MVPPVLTSPD IFHYIVQTDE ANMVSWRLID  120
NVSIAISISL HIDMRIEDAL IEASERWKRV CENTATEFSW KMGLRDYPMD ESSIGFYFQS  180
PPFYQWLKTP PSSSSASSSS SSSSRSSSSS SYSSPPQQDQ EMVLQQDHLP SQGLRCLPLL  240
SRLEEAGKHI KEGHKGDRDD VGTEEKRRLM CKKEVHRKEA SEESVRSSCS GSESRYWIPT  300
ATQILIGLEK FACSVCNKTF NRYNNLQVSL SLSLSLLLLL PHLLMFPSAS SSLLSSGMAL  360
LFPHTSCLFL RVHGTEHTNE CILR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	7e-11	C2H2 family protein