PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32461.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 780aa MW: 83952.3 Da PI: 7.7991

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.9	5.2e-36	423	516	2	95
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaa 95 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el++++ s+s++ a++ss + ++s + ++++a RWW32461.1 423 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLMKNAKAAIDELAELPPWSPSATVAAASSRRHPQPSGHLPSAEQA 516 79**************************************************************665555553333333333333332222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
MDAPPSAEVV APPAAAVPDN RPSSPTARFP NPSSAPQKPE IHGNAEGPTG VVGQKETAPT 60 AVEAAVVAGQ SNSDASEAAP VTDLQKKLRR AERFGTPVML SEEEKRNSRA ERSEATPVEE 120 TRSFKSPLLS CLPVQGSIRL WLLLAQISVL VVAILLFGTA STFDGGKIGG PLEEQKRKAR 180 AERCLLLLTQ QICPCALARP RSSRRRGSEV ALGGESSWVR LEEGIILPFV LTSPSMGRAV 240 PTKGGRWGRI DTADRCLGCD RASYRWLHDP KLEQGRRKGE QDLDPRRSLY LPIQADANES 300 EKEGQVAPQG LQEQQREEQS LQGFQLHQIH HNRSSYFSSS SSSAATASSS EYACLPERIG 360 EGHSHNSAGY DQLALLHHHH QQQQQQQQQQ LQRPQPRSRH VGARGGAIGE IVEVQGGHIV 420 RSTGRKDRHS KVCTAKGPRD RRVRLSAHTA IQFYDVQDRL GYDRPSKAVD WLMKNAKAAI 480 DELAELPPWS PSATVAAASS RRHPQPSGHL PSAEQAIGES SSKPVAVADP ALSTAFSFGA 540 GGGNGGNESN TFLPPSLDTD SIADTIKSFF PMAAAATPPS SSPSIGFLSY SPELPSRTSG 600 QAQDLRLSLQ SFQDPIFHNP ESGHHHHHSQ YHQSPTPSRH DAHFPSSAQL ASDVAGWAEQ 660 SHRIAPWNMV DSSGGGGGYV FSFPPPQAAP LHSLLGQSLF FSQRGPLQSS NSPAVRAWAD 720 PVDAAADHRM QPALYPSMPS IGFASGASFS GFRIPARIQG EEEHDGHNDK PPSAASASRH

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

MDAPPSAEVV APPAAAVPDN RPSSPTARFP NPSSAPQKPE IHGNAEGPTG VVGQKETAPT  60
AVEAAVVAGQ SNSDASEAAP VTDLQKKLRR AERFGTPVML SEEEKRNSRA ERSEATPVEE  120
TRSFKSPLLS CLPVQGSIRL WLLLAQISVL VVAILLFGTA STFDGGKIGG PLEEQKRKAR  180
AERCLLLLTQ QICPCALARP RSSRRRGSEV ALGGESSWVR LEEGIILPFV LTSPSMGRAV  240
PTKGGRWGRI DTADRCLGCD RASYRWLHDP KLEQGRRKGE QDLDPRRSLY LPIQADANES  300
EKEGQVAPQG LQEQQREEQS LQGFQLHQIH HNRSSYFSSS SSSAATASSS EYACLPERIG  360
EGHSHNSAGY DQLALLHHHH QQQQQQQQQQ LQRPQPRSRH VGARGGAIGE IVEVQGGHIV  420
RSTGRKDRHS KVCTAKGPRD RRVRLSAHTA IQFYDVQDRL GYDRPSKAVD WLMKNAKAAI  480
DELAELPPWS PSATVAAASS RRHPQPSGHL PSAEQAIGES SSKPVAVADP ALSTAFSFGA  540
GGGNGGNESN TFLPPSLDTD SIADTIKSFF PMAAAATPPS SSPSIGFLSY SPELPSRTSG  600
QAQDLRLSLQ SFQDPIFHNP ESGHHHHHSQ YHQSPTPSRH DAHFPSSAQL ASDVAGWAEQ  660
SHRIAPWNMV DSSGGGGGYV FSFPPPQAAP LHSLLGQSLF FSQRGPLQSS NSPAVRAWAD  720
PVDAAADHRM QPALYPSMPS IGFASGASFS GFRIPARIQG EEEHDGHNDK PPSAASASRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-78	TCP family protein