PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32506.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 202aa MW: 24221.2 Da PI: 7.7822

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.6	2.9e-18	6	49	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 W +eEde+l+ +v+++G+++W++Ia++++ gR++k+c++rw++ RWW32506.1 6 HWIPEEDEKLKALVTKYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49 699*************************.*********996 PP
2	Myb_DNA-binding	56.3	7.2e-18	56	99	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++T++E+ell+ a++ +G++ W+ Iar ++ gRt++ +k++w+ RWW32506.1 56 RKPFTKDEEELLLAAHEIYGNR-WAIIARLFP-GRTDNAVKNHWHV 99 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MYSKCHWIPE EDEKLKALVT KYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRKPFT 60 KDEEELLLAA HEIYGNRWAI IARLFPGRTD NAVKNHWHVI MVRRHKQQRG DQSTFAEEEE 120 SKRSKKRQLE PRNMLLIVEE YHRRSDTVHQ HGFYPDDMQE LYDFLQVNGD SKDVRREGEG 180 YEDREEDAKF IDFLQVGSKE RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	4e-61	MYB family protein