PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW32516.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family BBR-BPC
Protein Properties Length: 283aa    MW: 31137.4 Da    PI: 9.2745
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW32516.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind281.93e-8612831301
   GAGA_bind   1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdakirernlalsekkaavaerd.........maflqrdkalaernkalverdnkllalllven 89 
                 mdddg +  rn++y++++  lk + gl+ mss+a    +++ + l    +++a+++r+         m+          rn+ +  r+n +l++l++++
  RWW32516.1   1 MDDDGGMGmRNWAYFDQT--LKGDSGLHPMSSMAAEYGAPKPSFL----PNGAFHRREcfipeqpdrMDI-T-------RNEWINLRENDVLHMLPMND 85 
                 999999999*******99..*************988888888877....999999999544444444444.4.......5555666**********888 PP

   GAGA_bind  90 slasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesadersk 188
                  ++  +    +v++g++s  ++q         ++ + +e +k+  + + ++  +   +k+++ r+++   k++k k+ kk   +s k+++++++ ++ +
  RWW32516.1  86 CSS--AMGDAGVSHGAHSFSMMQS--------TPLPPPEGDKI--TAVDDELGKDVPQKRSQPRAQTCPHKASKPKRLKKVA-VS-KDESSSRMGHEGR 170
                 633..2234566666666666665........44443344433..3444555555555555555677778888888888844.33.333344445789* PP

   GAGA_bind 189 aekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkd 287
                 + ++s  l++ng++lD s++P+P+CsCtG+++qCY+WG+GGWqSaCCtt iS+yPLP+stkrrgaRiagrKmSqgafkk+L+ Laa Gy+ls p+DLk 
  RWW32516.1 171 NLRQSSALNINGIDLDVSNIPTPLCSCTGMPHQCYRWGAGGWQSACCTTGISTYPLPMSTKRRGARIAGRKMSQGAFKKVLANLAAKGYNLSDPIDLKP 269
                 *************************************************************************************************** PP

   GAGA_bind 288 hWAkHGtnkfvtir 301
                 +WAkHGtnkfvtir
  RWW32516.1 270 YWAKHGTNKFVTIR 283
                 *************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MDDDGGMGMR NWAYFDQTLK GDSGLHPMSS MAAEYGAPKP SFLPNGAFHR RECFIPEQPD  60
RMDITRNEWI NLRENDVLHM LPMNDCSSAM GDAGVSHGAH SFSMMQSTPL PPPEGDKITA  120
VDDELGKDVP QKRSQPRAQT CPHKASKPKR LKKVAVSKDE SSSRMGHEGR NLRQSSALNI  180
NGIDLDVSNI PTPLCSCTGM PHQCYRWGAG GWQSACCTTG ISTYPLPMST KRRGARIAGR  240
KMSQGAFKKV LANLAAKGYN LSDPIDLKPY WAKHGTNKFV TIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.11e-68BBR-BPC family protein