PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32532.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 442aa MW: 49500.6 Da PI: 5.1296

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	71.4	1.7e-22	36	151	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 +Wt+ +v++Li+++ +++++ + ++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk++++ +k RWW32532.1 36 KWTDGMVRLLIQVVYRVGDDGGGAEgeqqqpqgsvakgkksssaaaaasasallQKKGKWKSVSRAMMEKGFFVSPQQCEDKFNDLNKRYKRVNDLLGK 134 7**********998888887554456778888888999999999999************************************************ PP trihelix 71 r.tsessstcpyfdqle 86 + +++++++ ++++ ++ RWW32532.1 135 GtACRVVENQSLLETMD 151 559*****9999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MSSEEEPRYG DEVDDQVRRG GMSQPSPSAS PWQRMKWTDG MVRLLIQVVY RVGDDGGGAE 60 GEQQQPQGSV AKGKKSSSAA AAASASALLQ KKGKWKSVSR AMMEKGFFVS PQQCEDKFND 120 LNKRYKRVND LLGKGTACRV VENQSLLETM DLSPTAKEEA RKLLNSKHLF FREMCAYHNA 180 GAYSACAASP PLQMPPPHSS DQQQQQHCFH HPPGRADTAL STRKAAAGGS RAAVVADEEG 240 MAEEMDDDDD DDVDSEDDDE YDDEDDDEDD DMEDHNHKRQ GHHQHKHEEV GEDEDTKKHK 300 KTASQASASP PLSLTLSSPS SSAQQLRSEM VVMSGGGEQQ QRQWLKRKAT ELEEQRVAYQ 360 CRAFQLERQR FKWLRFSTNK EREMERMKLE NERLRLENDR MALLLRQREL ELIQGGGGGV 420 SSAEQQLMLQ NTNANPNSAT TV

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MSSEEEPRYG DEVDDQVRRG GMSQPSPSAS PWQRMKWTDG MVRLLIQVVY RVGDDGGGAE  60
GEQQQPQGSV AKGKKSSSAA AAASASALLQ KKGKWKSVSR AMMEKGFFVS PQQCEDKFND  120
LNKRYKRVND LLGKGTACRV VENQSLLETM DLSPTAKEEA RKLLNSKHLF FREMCAYHNA  180
GAYSACAASP PLQMPPPHSS DQQQQQHCFH HPPGRADTAL STRKAAAGGS RAAVVADEEG  240
MAEEMDDDDD DDVDSEDDDE YDDEDDDEDD DMEDHNHKRQ GHHQHKHEEV GEDEDTKKHK  300
KTASQASASP PLSLTLSSPS SSAQQLRSEM VVMSGGGEQQ QRQWLKRKAT ELEEQRVAYQ  360
CRAFQLERQR FKWLRFSTNK EREMERMKLE NERLRLENDR MALLLRQREL ELIQGGGGGV  420
SSAEQQLMLQ NTNANPNSAT TV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	8e-51	Trihelix family protein