PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32608.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 461aa MW: 50792.6 Da PI: 8.9101

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.3e-05	32	54	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RWW32608.1 32 FVCEICNKGFQRDQNLQLHRRGH 54 89*******************88 PP
2	zf-C2H2	12	0.00064	108	130	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + RWW32608.1 108 WKCEKCSKKYAVQSDWKAHSKIC 130 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
PLILLGFSFC VSDPDAEVIA LSPKTLMATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL 60 KQRSSKEVRK KVYICPEVTC VHHDPSRALG DLTGIKKHFS RKHGEKKWKC EKCSKKYAVQ 120 SDWKAHSKIC GTREYRCDCG TLFSRRDSFI THRAFCDALA EESARAIAAN PLAPNHHPLL 180 FPQPTVASYE SSPLQQTLFR SQYPHLMRAN EVNDSIIGGN GIQQELSSKR AHQHQQFPPW 240 LASQGLASLN HLDLLPSPAY PSRSEQEWPR ENPGVPHPPL PPAFQPSASS PHMSATALLQ 300 KAAMMGATMS RPSHLGLTAA HTTSSAVVAS STSSFGLDLS SHEDMGAAVL EQRSAAPPLM 360 QDMVIKTSLS STPGFDGLFE DTIGGILGTK REPKITMGSF ARSHGKSEEG GGGNDGMTRD 420 FLGLKAFPHR EDILNLAGFD PRLCSSSSYE QQQQSKKLWH G

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

PLILLGFSFC VSDPDAEVIA LSPKTLMATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL  60
KQRSSKEVRK KVYICPEVTC VHHDPSRALG DLTGIKKHFS RKHGEKKWKC EKCSKKYAVQ  120
SDWKAHSKIC GTREYRCDCG TLFSRRDSFI THRAFCDALA EESARAIAAN PLAPNHHPLL  180
FPQPTVASYE SSPLQQTLFR SQYPHLMRAN EVNDSIIGGN GIQQELSSKR AHQHQQFPPW  240
LASQGLASLN HLDLLPSPAY PSRSEQEWPR ENPGVPHPPL PPAFQPSASS PHMSATALLQ  300
KAAMMGATMS RPSHLGLTAA HTTSSAVVAS STSSFGLDLS SHEDMGAAVL EQRSAAPPLM  360
QDMVIKTSLS STPGFDGLFE DTIGGILGTK REPKITMGSF ARSHGKSEEG GGGNDGMTRD  420
FLGLKAFPHR EDILNLAGFD PRLCSSSSYE QQQQSKKLWH G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	59	71	KLKQRSSKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-91	C2H2 family protein