PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32719.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NF-X1

Protein Properties

Length: 863aa MW: 95769.9 Da PI: 8.3433

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	19	3.1e-06	188	206	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H+C lCH+GpCppCp+ RWW32719.1 188 CG-HRCLLLCHPGPCPPCPK 206 .*************96 PP
2	zf-NF-X1	17.9	6.6e-06	367	386	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+H C++ C+ G+CppCp+ RWW32719.1 367 CGRHACKRRCCDGDCPPCPE 386 ******************96 PP
3	zf-NF-X1	18.2	5.6e-06	388	413	1	20
zf-NF-X1 1 CG......kHkCqklCHeGpCppCpq 20 CG +HkC ++CH+G C pCp+ RWW32719.1 388 CGrklrcnNHKCPSPCHRGACAPCPL 413 666666669***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 863 aa Download sequence
MAAAAGSRPP PIPDPASQLI FSDSDASGSD GDGDEAAGHG AVLEDSIFAA YLQISGRASA 60 DLSKIRSFLA SAAGRGPLVS CLICLERVRP GDPAWSCASG CHALFHLICI QSWAQQSSHR 120 PPSVTSPASA AAASSDWPCP KCRLPYPRTQ VPRSYLCFCG KVEDPPPDPW ILPHSCGEVC 180 DRPLRGQCGH RCLLLCHPGP CPPCPKLVSS RCFCGSREDV RRCAQKLEVY SCACGKTKEE 240 RECSEREFRC EARCTGMLGC GKHVCDRGCH SGPCGDCPLQ GRRTCPCGKK EYKGVSCDID 300 VPTCGSTCEK TLICKIHRCP ERCHRGPCVE TCRMVVMKSC RCGSLKKEVP CYQDLVCERK 360 CQQVKDCGRH ACKRRCCDGD CPPCPEICGR KLRCNNHKCP SPCHRGACAP CPLMVSISCS 420 CGETQFEVPC GTEKNQKPPR CSRPCRISRL CRHKSECRSH KCHYGACPPC RLVCGDELSC 480 GHKCKERCHG PVPPPNPEFT LKPTKKKLNK HLECVPGSPC PPCKEVIWVP CFGRHIGEER 540 AMLCHHKSQF SCQNLCGNLL SCGNHYCTKL CHVLKNQTST LDQYGQGDSN TEKQHQFLLN 600 AVTKQGEPCE DCFLPCQKVR EPSCPHPCPL PCHSSECPPC KVLVKRSCHC GTMVHAFECI 660 HYNSLSNEEQ RRIRSCGGPC HRKLPNCPHL CSEICHPDRC PSVDHCNKKV NVRCVCNNLK 720 KEWLCQEVLK AYCSSGRDPK DIPKNQFGVG ILACSTECEN KVKVVKSELQ HRKANETKDH 780 PVAEIASVPK RRRRRERNQE ARRASKFQII KSTIQRGLII SLIFMVIIAS VYYGYKGLFL 840 LSDWMNEMEE QRLNRRTAVP RFN

Sequence ? help Back to Top

Protein Sequence Length: 863 aa Download sequence

MAAAAGSRPP PIPDPASQLI FSDSDASGSD GDGDEAAGHG AVLEDSIFAA YLQISGRASA  60
DLSKIRSFLA SAAGRGPLVS CLICLERVRP GDPAWSCASG CHALFHLICI QSWAQQSSHR  120
PPSVTSPASA AAASSDWPCP KCRLPYPRTQ VPRSYLCFCG KVEDPPPDPW ILPHSCGEVC  180
DRPLRGQCGH RCLLLCHPGP CPPCPKLVSS RCFCGSREDV RRCAQKLEVY SCACGKTKEE  240
RECSEREFRC EARCTGMLGC GKHVCDRGCH SGPCGDCPLQ GRRTCPCGKK EYKGVSCDID  300
VPTCGSTCEK TLICKIHRCP ERCHRGPCVE TCRMVVMKSC RCGSLKKEVP CYQDLVCERK  360
CQQVKDCGRH ACKRRCCDGD CPPCPEICGR KLRCNNHKCP SPCHRGACAP CPLMVSISCS  420
CGETQFEVPC GTEKNQKPPR CSRPCRISRL CRHKSECRSH KCHYGACPPC RLVCGDELSC  480
GHKCKERCHG PVPPPNPEFT LKPTKKKLNK HLECVPGSPC PPCKEVIWVP CFGRHIGEER  540
AMLCHHKSQF SCQNLCGNLL SCGNHYCTKL CHVLKNQTST LDQYGQGDSN TEKQHQFLLN  600
AVTKQGEPCE DCFLPCQKVR EPSCPHPCPL PCHSSECPPC KVLVKRSCHC GTMVHAFECI  660
HYNSLSNEEQ RRIRSCGGPC HRKLPNCPHL CSEICHPDRC PSVDHCNKKV NVRCVCNNLK  720
KEWLCQEVLK AYCSSGRDPK DIPKNQFGVG ILACSTECEN KVKVVKSELQ HRKANETKDH  780
PVAEIASVPK RRRRRERNQE ARRASKFQII KSTIQRGLII SLIFMVIIAS VYYGYKGLFL  840
LSDWMNEMEE QRLNRRTAVP RFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	790	795	KRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein