PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32888.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 309aa MW: 34150.1 Da PI: 8.3288

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2e-11	129	175	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L ++P + kK++Ka++L A+eY+k+L+ RWW32888.1 129 EHVVAERKRREKLGQRFIALSAVVPGL-----KKMNKASVLGDAIEYLKQLE 175 5889*********************.....9***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MDQSFFDQWE WTALDQLSAH QLGAGLLQDV EPSPSSESHA SFPYVPPPAS TQRPEKATET 60 DAWCPRIISF GSPESPICRS GLYAPTTWPK EEMHVLIPGG SKKRDYDTMS GQGCKKANMA 120 ARTASRNPEH VVAERKRREK LGQRFIALSA VVPGLKKMNK ASVLGDAIEY LKQLEEKVKC 180 LEDQATKRKA VLVNKSRLCA DDDDRSSDEH PCGGPAPEIE ARVCDKAVFI KIHCENRKGV 240 LVKALSEIEK LHLSVANTSV IPFAAASLHI TVMTQARSTA LLLPTTVVPT NNMNELVIVF 300 FCRWKRSSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	139	ERKRRE
2	135	140	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	9e-48	bHLH family protein