PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW32921.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MIKC_MADS

Protein Properties

Length: 230aa MW: 26885.3 Da PI: 9.323

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW32921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.1	3.7e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdae+a+i+fs++g+lyeys+ RWW32921.1 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEIALIVFSTRGRLYEYSN 59 79***********************************************95 PP
2	K-box	111.8	7.1e-37	78	174	4	100
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ssg ++ + + ++qqe+akL+ +i+ Lq+ +Rhl+G++L+sLs+keL+qLe++Le+s+++iRskK+ell+++ie++qkke elq++n++Lr+k++e RWW32921.1 78 SSGAIVDVNSQHYYQQESAKLRHQIQILQNGNRHLMGDSLSSLSVKELKQLENRLERSITRIRSKKHELLFAEIEYMQKKEVELQSDNTYLRAKIAE 174 4445577888899*********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEIALIVFST RGRLYEYSNN 60 NIKSTIERYK KACADHSSSG AIVDVNSQHY YQQESAKLRH QIQILQNGNR HLMGDSLSSL 120 SVKELKQLEN RLERSITRIR SKKHELLFAE IEYMQKKEVE LQSDNTYLRA KIAENEREQQ 180 LSIMQAGTEY YTLPTFDPRN YYHTNMLETA ANYSHHQDQT TLHLGYDTKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	1e-105	MIKC_MADS family protein