PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW32939.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MIKC_MADS
Protein Properties Length: 190aa    MW: 22017.4 Da    PI: 10.3679
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW32939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.76.4e-281061151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE.EEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk.lyeyss 51
                krienk nrqvtf kRrng+lKKA+ELSvLCd++va+iifss+g+ l+e++s
  RWW32939.1 10 KRIENKVNRQVTFEKRRNGLLKKAYELSVLCDVDVALIIFSSRGRrLFEFCS 61
                79*****************************************954999986 PP
2K-box14.71.3e-06971257098
       K-box  70 nellleqieelqkkekelqeenkaLrkkl 98 
                 ++++++q+ +l +ke+ lqe+n++Lr++l
  RWW32939.1  97 MRVMFDQLCDLNRKEQVLQEANTNLRRQL 125
                 579***********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MGRRGKVELK RIENKVNRQV TFEKRRNGLL KKAYELSVLC DVDVALIIFS SRGRRLFEFC  60
SSSRYYIHVH AKVRAVNSRV SSSISFLSFF FGRFAFMRVM FDQLCDLNRK EQVLQEANTN  120
LRRQLISLLK QKDSISPKEK THPCKLDSIY PAQLLGTMKP QKAIDSSQDG FENLSSLTSN  180
LSYFYSPIEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.39e-30MIKC_MADS family protein