PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW32993.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HD-ZIP
Protein Properties Length: 554aa    MW: 61261.2 Da    PI: 7.4689
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW32993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.5e-192380457
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  RWW32993.1 23 YVRYTPEQVEALERVYNECPKPSSLRRQQLIRECpilsNIDPKQIKVWFQNRRCREKQ 80
                6789****************************************************97 PP
2START168.54.4e-531713772203
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W +++++ ++l vi +g  g ++l ++++
  RWW32993.1 171 IAEETLAEFLSKATGTAVEWVQMIGMKPGPDSIGIVAVSHSCSGVAARACGLVNLEPT-KVAEILKDRLSWYHDCRSLDVLTVIPTGngGNIELLYMQT 268
                 68999*****************************************************.8999999999****************************** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l++ Rdf+++Ry+ +l++g++vi+++S+++ +  p     s ++Ra+ lpSg+li+p+++g+s +++v+hvdl+ +++++++r+l++s+ + ++
  RWW32993.1 269 YAPTTLASaRDFWILRYTTCLEDGSLVICERSLTPSTGGPVgpaASDFIRATILPSGYLIRPCEGGGSMMHIVDHVDLDVWSVPEVIRPLYESSEILAQ 367
                 ****************************************9999******************************************************* PP

                 HHHHHHTXXX CS
       START 194 ktwvatlqrq 203
                 k+++a++++ 
  RWW32993.1 368 KMTLAAFRHI 377
                 *****99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    
MPMIVSGKEA GKEQKLAMDA GKYVRYTPEQ VEALERVYNE CPKPSSLRRQ QLIRECPILS  60
NIDPKQIKVW FQNRRCREKQ KKEACRLQAV NRKLTAMNKL LMEENDRLQK QVSQLVCENG  120
YMRQQLHNAS VATTDTSCES VVTSGQHHHQ QNPTPQCPQK DPNNPAGLLA IAEETLAEFL  180
SKATGTAVEW VQMIGMKPGP DSIGIVAVSH SCSGVAARAC GLVNLEPTKV AEILKDRLSW  240
YHDCRSLDVL TVIPTGNGGN IELLYMQTYA PTTLASARDF WILRYTTCLE DGSLVICERS  300
LTPSTGGPVG PAASDFIRAT ILPSGYLIRP CEGGGSMMHI VDHVDLDVWS VPEVIRPLYE  360
SSEILAQKMT LAAFRHIRQI SQEVSGEIAY VGRHQPAVLR TFIRRLNRGF NDAVNGFADD  420
GWSLMGSDGV EDVTIAINSS PNKFHRFHFN SSTVFSGIGC GILCAKASML LQNVPPALLV  480
CFLKEHRSEW ADFGVDAYSA SSLRASPYVV PGVRSGSNFV GGQIILPLAH TTEHEEVILL  540
LPAKNKAFTF LWFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein