PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW33115.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 272aa MW: 31017.7 Da PI: 4.7987

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW33115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.6	2.1e-18	63	111	9	57
HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k+ ++ Le+ Fe+++++ e++ eLA+klgL+ rqV vWFqNrRa++k+ RWW33115.1 63 KKKVRLLERSFEEENKLEPERKSELAQKLGLQPRQVAVWFQNRRARWKN 111 678899*****************************************95 PP
2	HD-ZIP_I/II	114	9.1e-37	62	148	7	93
HD-ZIP_I/II 7 skeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k++v+lLE+sFeee+kLeperK+ela++LglqprqvavWFqnrRAR+k+kqlE+d+++Lk++ydal ++++L k++++Lr+++++ RWW33115.1 62 KKKKVRLLERSFEEENKLEPERKSELAQKLGLQPRQVAVWFQNRRARWKNKQLEHDFDQLKSSYDALLFDHDALLKDNDRLRSQVNT 148 56789******************************************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MLGNKAVRPV VVGVTEKGGA SKRRPFFTSP DEVYDEYYEE QLPEKKRRLT SDQRITICFG 60 VKKKKVRLLE RSFEEENKLE PERKSELAQK LGLQPRQVAV WFQNRRARWK NKQLEHDFDQ 120 LKSSYDALLF DHDALLKDND RLRSQVNTLA EKLEANEQGA SGVTVLMVDD QAASTADLTV 180 LNIQQKKVAD MLSPGSGGSA VVEAEVGHHV VESSRESYLP ENYHCVELVD VVGIHSEDDM 240 SDEGCSYYPD GMFTEHQQPE EVEAQLDWCI WN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	45	65	KKRRLTSDQRITICFGVKKKK
2	46	66	KKRRLTSDQRITICFGVKKKK
3	105	113	RRARWKNKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-53	HD-ZIP family protein