PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW33127.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NAC

Protein Properties

Length: 380aa MW: 42978.9 Da PI: 7.023

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW33127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.2	9.3e-55	16	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhP dee++++yL +k+ + +++ ++i evd++++ePwdLp+k+k +ek++yfF++rd+ky+tg r+nrat+sgyWkatgkdke+++ kg l RWW33127.1 16 LPPGFRFHPMDEEIITHYLSRKIIDYGFTA-RAIGEVDLNRCEPWDLPSKAKMGEKDMYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIYRGKGVL 113 79***********************999.89***********99999****************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrapkg+kt+Wvmhe+rle RWW33127.1 114 VGMKKTLVFYKGRAPKGQKTNWVMHEFRLE 143 *************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MADVSVPDKG DDCMDLPPGF RFHPMDEEII THYLSRKIID YGFTARAIGE VDLNRCEPWD 60 LPSKAKMGEK DMYFFCQRDR KYPTGMRTNR ATESGYWKAT GKDKEIYRGK GVLVGMKKTL 120 VFYKGRAPKG QKTNWVMHEF RLEGKYSLPN LPKSAKVLPA SVLFFSCLFH HLNVIRFVLL 180 QDEWVVCRIF HKNIGPRKSP PPGMERINSY GDDLLDSGTL PPLMDPPHME YTTMGPGSSF 240 TNNDQIFDFK ALPPSFSAMM AMENQQVMNH HQMISNPLPH NPALLYAQPP PQSAYYSLLG 300 SANPGYLHHD EAMMGAFAAT DNDAPSAIRK HCKVEQYSNQ SVGCPSQDTG LSTDRNTEIS 360 SVVSKHYVDD LDDPWTNYGF

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MADVSVPDKG DDCMDLPPGF RFHPMDEEII THYLSRKIID YGFTARAIGE VDLNRCEPWD  60
LPSKAKMGEK DMYFFCQRDR KYPTGMRTNR ATESGYWKAT GKDKEIYRGK GVLVGMKKTL  120
VFYKGRAPKG QKTNWVMHEF RLEGKYSLPN LPKSAKVLPA SVLFFSCLFH HLNVIRFVLL  180
QDEWVVCRIF HKNIGPRKSP PPGMERINSY GDDLLDSGTL PPLMDPPHME YTTMGPGSSF  240
TNNDQIFDFK ALPPSFSAMM AMENQQVMNH HQMISNPLPH NPALLYAQPP PQSAYYSLLG  300
SANPGYLHHD EAMMGAFAAT DNDAPSAIRK HCKVEQYSNQ SVGCPSQDTG LSTDRNTEIS  360
SVVSKHYVDD LDDPWTNYGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	3e-98	NAC family protein