PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW33306.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 206aa MW: 22880 Da PI: 8.6076

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW33306.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.2	1e-41	8	107	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaC++lrrkC+++Cv+apyfp +qp kf vh++FGasnv kll +l++ +reda++sl+yeAear++dPvyG+vg+i lq++l+q++ +l +++ RWW33306.1 8 PCAACRFLRRKCTPGCVFAPYFPPDQPMKFTSVHRVFGASNVAKLLGELSPWQREDAVNSLAYEAEARLHDPVYGCVGHICFLQRKLHQVQRDLYNARK 106 7********************************************************************************************998887 PP DUF260 100 e 100 e RWW33306.1 107 E 107 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MSAASSSPCA ACRFLRRKCT PGCVFAPYFP PDQPMKFTSV HRVFGASNVA KLLGELSPWQ 60 REDAVNSLAY EAEARLHDPV YGCVGHICFL QRKLHQVQRD LYNARKELSA YLSAPIADPH 120 HQQPQAASPS SHQQILLHEL QQQMAAVQQI AANRERDNQQ EMSRFSTVFQ MAGGATMAAT 180 TGLPALLPPR PSEGVFSLQQ QHNERK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	2e-47	LBD family protein