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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW33449.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | HB-other | ||||||||
| Protein Properties | Length: 227aa MW: 25018.7 Da PI: 8.654 | ||||||||
| Description | HB-other family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 55.8 | 7.8e-18 | 22 | 76 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
kR t++qle+Le+ ++ + yps++ r eL+ k+gL++rq ++WF+ rR k++k
RWW33449.1 22 KRKMKTPYQLEILESTYAVETYPSEALRGELSVKTGLSDRQLQMWFCHRRLKDRK 76
89999************************************************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 227 aa Download sequence |
MEAGDGEQAR PPPAEGGDKP PKRKMKTPYQ LEILESTYAV ETYPSEALRG ELSVKTGLSD 60 RQLQMWFCHR RLKDRKVQSA RKHRREAESL PLTPPPPVLP PQNDSLFSSP YGSSGQSRRA 120 ATRTVAAVSR IGTEMSAVGS RYYDALLPLP PTHLGHLALM ERQILASVEA QLGEPLRQDG 180 PVLGVEFDPL PPGAFGVPIG ITSHYLDTKN IIFCYGHVIL LVHMFIS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G28420.1 | 1e-39 | HB-other family protein | ||||




