PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW33537.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 260aa MW: 31789.9 Da PI: 6.0038

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW33537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	75.3	1e-23	27	108	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt++e+++L+++r ++++++ ++k++kplWe+ s+ ++++gf r+p qCk+kw+nl +r+k i+ e++ +++p++++++ RWW33537.1 27 QWTHDETRELLAIRAQLDRSFTETKRNKPLWEATSSMLQQKGFFRTPDQCKSKWKNLVTRFKGIESAEGEI----GKQFPFYEEMR 108 7******************************************************************96....5679***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MDLHRQRLNP YALVNPPPPE SVERFPQWTH DETRELLAIR AQLDRSFTET KRNKPLWEAT 60 SSMLQQKGFF RTPDQCKSKW KNLVTRFKGI ESAEGEIGKQ FPFYEEMRRI FSDRMERLLV 120 FEKEKGKGVQ VRIKEWEEEA EEDEEEEEEE GKAEESKKRR KVTRKKNLEE EVKDALREFM 180 RRQLEMEARW AEAAEAREAE RRTREEEWRR VMESLQEERM EMEKRWRERE EERRAREEAR 240 AERRHALVMA LLDKLAQKYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	161	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38250.1	3e-37	Trihelix family protein