PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW33577.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 198aa MW: 21780.8 Da PI: 6.6106

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW33577.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	41.7	3.4e-13	51	86	1	36
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhkl 36 +CaaCk+lrr+Ca+ Cvlapyfp ++p kf +h++ RWW33577.1 51 PCAACKILRRRCADRCVLAPYFPPTEPLKFTTAHRV 86 7**********************************8 PP
2	DUF260	52.6	1.4e-16	86	134	52	100
DUF260 52 eeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +r da+ss+vyeA+ar+rdPvyG++g i++lq+q+++l+a+la++++e RWW33577.1 86 VQRADAVSSMVYEANARIRDPVYGCAGAIFQLQKQVSELQAQLARAHAE 134 589******************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MKPPSPPPSS PLMDSSDTTT GFHHLSSSPT TSRISSPPPL PPTHPAAIHS PCAACKILRR 60 RCADRCVLAP YFPPTEPLKF TTAHRVQRAD AVSSMVYEAN ARIRDPVYGC AGAIFQLQKQ 120 VSELQAQLAR AHAELINLQA QQKNLIALIC MEMAQTQQDY CTPQSVNALA DSPDLYQNEA 180 YFLDEISHGS AWDEPLWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	1e-55	LBD family protein