PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW33752.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 617aa MW: 66616.7 Da PI: 6.4675

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW33752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.3e-12	436	480	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h e+Er+RR+++N++f Lr+++P+ K++Ka+ L Av YI++L RWW33752.1 436 HVEAERQRREKLNQRFYALRSVVPNV-----SKMDKASLLADAVTYINEL 480 899********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MQLSDHRRAL MNLWNDDNTS VMEAFLSSSA TVAAHDHHSF WPPLPPPPAS IPASSSSTIS 60 STHSTVTSSA PAHFSPDTLQ QRLHSLIEGA RETWTYAIFW QSSPASGSAV LTWGDGYYRG 120 CEEDKRKPLR SGASSTAEQE HRKRVLRELN ALIYGGCGGG DDAADEEVTD TEWFFLVSMT 180 QTFALGAGHP GQAFLSGSPV WIAGADRMAA APCERVRQAQ AFGLRTMACV PLESGVVELG 240 STHDIFQNSE ILSKVRLLFG QGSGGRLAAA SWPPPQPAVA EQGVLDPSML WMSEPPAPKA 300 PSHFDKPNSG SLTENTNLNF TGEIKTIPSA SAGGGGGALY VDNHISYEIK KATSKESNDE 360 AFLSSSADVV VAAVKSEGGC GGGSGGGNLF GADSDHSDLE ASTREVTSSA VMEPPEKRPK 420 KRGRKPANGR EEPLDHVEAE RQRREKLNQR FYALRSVVPN VSKMDKASLL ADAVTYINEL 480 RSKTQALESD KRKLQSELGA LKMERESASG RQMPPAGPGP AASNRAGRCS EVEVEVKILG 540 WEAMIRVQCD RRCHPSARLM MALRELDLEV YYANVSAVKD LMIQQVTVKM TSRIYTQEQL 600 TAALFASLRA DHPPHAM

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MQLSDHRRAL MNLWNDDNTS VMEAFLSSSA TVAAHDHHSF WPPLPPPPAS IPASSSSTIS  60
STHSTVTSSA PAHFSPDTLQ QRLHSLIEGA RETWTYAIFW QSSPASGSAV LTWGDGYYRG  120
CEEDKRKPLR SGASSTAEQE HRKRVLRELN ALIYGGCGGG DDAADEEVTD TEWFFLVSMT  180
QTFALGAGHP GQAFLSGSPV WIAGADRMAA APCERVRQAQ AFGLRTMACV PLESGVVELG  240
STHDIFQNSE ILSKVRLLFG QGSGGRLAAA SWPPPQPAVA EQGVLDPSML WMSEPPAPKA  300
PSHFDKPNSG SLTENTNLNF TGEIKTIPSA SAGGGGGALY VDNHISYEIK KATSKESNDE  360
AFLSSSADVV VAAVKSEGGC GGGSGGGNLF GADSDHSDLE ASTREVTSSA VMEPPEKRPK  420
KRGRKPANGR EEPLDHVEAE RQRREKLNQR FYALRSVVPN VSKMDKASLL ADAVTYINEL  480
RSKTQALESD KRKLQSELGA LKMERESASG RQMPPAGPGP AASNRAGRCS EVEVEVKILG  540
WEAMIRVQCD RRCHPSARLM MALRELDLEV YYANVSAVKD LMIQQVTVKM TSRIYTQEQL  600
TAALFASLRA DHPPHAM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	417	425	KRPKKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	6e-76	bHLH family protein