PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW33777.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 136aa    MW: 15314.7 Da    PI: 11.6296
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW33777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.33.6e-2777126251
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 rien++ rqvtfskRr+g+lKKA+EL +LCdaev v++fs tg+ly+y+s
  RWW33777.1  77 RIENSTSRQVTFSKRRKGLLKKAKELAILCDAEVGVVVFSATGRLYDYAS 126
                 8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MGALSAHMRW RGGGGGGERF PPQEPPAPTQ NLPPPPSPAV SQHLKPSSPT EPYIWFLEVR  60
RRRRRRSMGR GKIAICRIEN STSRQVTFSK RRKGLLKKAK ELAILCDAEV GVVVFSATGR  120
LYDYASSRYS FFLLWT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16065RRRRRR
26066RRRRRRR
360100RRRRRRRSMGRGKIAICRIENSTSRQVTFSKRRKGLLKKAK
46166RRRRRR
561101RRRRRRRSMGRGKIAICRIENSTSRQVTFSKRRKGLLKKAK
662102RRRRRRRSMGRGKIAICRIENSTSRQVTFSKRRKGLLKKAK
763103RRRRRRRSMGRGKIAICRIENSTSRQVTFSKRRKGLLKKAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.21e-33MIKC_MADS family protein