PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW33814.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GRAS

Protein Properties

Length: 1154aa MW: 125235 Da PI: 8.0923

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW33814.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	264.5	3.6e-81	791	1153	2	374
GRAS 2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 + L+++Ae +++g++ a+ +Larl+++ p g+p+ R a+yf+eAL+ lar+ ++ lp +++ +++ +l +k+fs+vsPi++f+ +t RWW33814.1 791 SDHLFKAAELIEAGNTVSARGILARLNHQlPFPVGKPLLRSAFYFKEALHL-LARHFPQPPPPLPNPISTPLDVVLKLGTYKTFSDVSPIVQFAIFT 886 5789*********************99899*************86.556689999899888888899******************** PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 + q +lea++g +++HiiDfdi+ G+QW ++q+La+R + +p l+i ++ s+ +++ el+ ++++L +fA +l++pfefn+l +l+ ++ RWW33814.1 887 CIQPLLEALDGGRCIHIIDFDIGVGIQWSVFMQELAQRWsstmAATPCLKISAFTSSCTHHPLELHLIHQNLCHFAGSLNIPFEFNFL---SLDPFD 980 **********************************96666669******9999***********************9...999999 PP GRAS 191 leeL..rvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 ++ L r++ +Ea+aVnl + + ++++++++vk+lsPk++v v++ +d+ + +F++++l+a++ ++l+ds++a ++++++k RWW33814.1 981 PSVLlrRCSVvDEAIAVNLPVGWAISP--------PIPTLIDFVKQLSPKILVSVDHGCDRIDLPFAHHILHAFQSLTVLLDSIDAA--GANQAAAK 1067 99994444449******888777........6678*****************************************888..689* PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 E++l++++++++v + e++ Wr +e+aGF p+++s++a++qa++ll++v +g++ve+++ sl l+W++ +LvsvSaW+ RWW33814.1 1068 FEQFLVRPRVESAVLGHHCL----SEKMLPWRTLFESAGFVPMHFSNFAEMQAESLLKRVLARGFHVEKHQSSLSLCWQHGELVSVSAWK 1153 ***********99998....99999**********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1154 aa Download sequence
MLDLQHAAAF LPRTRILASP DYAVTANSDI CIITAGARQI PGETRLNLLQ RNLALFKEIV 60 PPLARYSPGT LLLVVSNPVD VLTYIAWKLS GFPPNRVIGS GTNLDSSRFR FLLADHLEVN 120 AQDVQAYMVG EHGDSSVALW SSMSVGGVPI LSQLTNDKAV VEQGVLEKIR KAVVESAYEV 180 IRLKGYTSWA IGYSVANLAR SLLRDQHSIH PVSLLAKGFY GIPDDREVFL SLPAQLGRSG 240 ILSVANIHLS DEEAARLRRS ANTLRQARGV GISRGMLLQV KEVHGEEEIT SLHPHFSGLQ 300 DSYHVKKGVE EKKRGRLHCN STSKRGFRCK RKVMRVALQF QVEKRKENRH QPGNVPLSPA 360 PSTGRFDRHP TALMNRSPTL AGPANWTSVI GERAMLTAPV SRGELQTKLR WVREFGGDRS 420 GIFGGFCGSG GGVADSSMGG GMPLALQEKG APLQVLEGEE GLFCCAASSS TAADNSNSNR 480 KRKERADEQE RLVLEPRSVL ESLRSPSPPS SASTLSPTRG GGGGVPASSG GSDSATPSAA 540 EEARRKEELP PVPANEEFSL GGVWEDLLLE QAAFIGQDQT FLRWIISEAD NTSYVGHGGT 600 RSHFDPALEV EGASVSAEVI NHLPLTSSVL STSGATFGCG SVNPNSCFPP PAASTLPVSL 660 SPMQSGVLFK ESTEGKPFLC PSLFLAQQQQ ARFPHQSSFF LPLHQFAGHH GGQPPRHLGP 720 SPRRPPAAHP FPISRAPELR RPNTPQQPGF SRQFNASACE PQPPPAKPKL ASGDEAPAAA 780 AAAAQQQQAL SDHLFKAAEL IEAGNTVSAR GILARLNHQL PFPVGKPLLR SAFYFKEALH 840 LLARHFPQPP PPLPNPISTP LDVVLKLGTY KTFSDVSPIV QFAIFTCIQP LLEALDGGRC 900 IHIIDFDIGV GIQWSVFMQE LAQRWSSTMA ATPCLKISAF TSSCTHHPLE LHLIHQNLCH 960 FAGSLNIPFE FNFLSLDPFD PSVLLRRCSV VDEAIAVNLP VGWAISPPIP TLIDFVKQLS 1020 PKILVSVDHG CDRIDLPFAH HILHAFQSLT VLLDSIDAAG ANQAAAKFEQ FLVRPRVESA 1080 VLGHHCLSEK MLPWRTLFES AGFVPMHFSN FAEMQAESLL KRVLARGFHV EKHQSSLSLC 1140 WQHGELVSVS AWKC

Sequence ? help Back to Top

Protein Sequence Length: 1154 aa Download sequence

MLDLQHAAAF LPRTRILASP DYAVTANSDI CIITAGARQI PGETRLNLLQ RNLALFKEIV  60
PPLARYSPGT LLLVVSNPVD VLTYIAWKLS GFPPNRVIGS GTNLDSSRFR FLLADHLEVN  120
AQDVQAYMVG EHGDSSVALW SSMSVGGVPI LSQLTNDKAV VEQGVLEKIR KAVVESAYEV  180
IRLKGYTSWA IGYSVANLAR SLLRDQHSIH PVSLLAKGFY GIPDDREVFL SLPAQLGRSG  240
ILSVANIHLS DEEAARLRRS ANTLRQARGV GISRGMLLQV KEVHGEEEIT SLHPHFSGLQ  300
DSYHVKKGVE EKKRGRLHCN STSKRGFRCK RKVMRVALQF QVEKRKENRH QPGNVPLSPA  360
PSTGRFDRHP TALMNRSPTL AGPANWTSVI GERAMLTAPV SRGELQTKLR WVREFGGDRS  420
GIFGGFCGSG GGVADSSMGG GMPLALQEKG APLQVLEGEE GLFCCAASSS TAADNSNSNR  480
KRKERADEQE RLVLEPRSVL ESLRSPSPPS SASTLSPTRG GGGGVPASSG GSDSATPSAA  540
EEARRKEELP PVPANEEFSL GGVWEDLLLE QAAFIGQDQT FLRWIISEAD NTSYVGHGGT  600
RSHFDPALEV EGASVSAEVI NHLPLTSSVL STSGATFGCG SVNPNSCFPP PAASTLPVSL  660
SPMQSGVLFK ESTEGKPFLC PSLFLAQQQQ ARFPHQSSFF LPLHQFAGHH GGQPPRHLGP  720
SPRRPPAAHP FPISRAPELR RPNTPQQPGF SRQFNASACE PQPPPAKPKL ASGDEAPAAA  780
AAAAQQQQAL SDHLFKAAEL IEAGNTVSAR GILARLNHQL PFPVGKPLLR SAFYFKEALH  840
LLARHFPQPP PPLPNPISTP LDVVLKLGTY KTFSDVSPIV QFAIFTCIQP LLEALDGGRC  900
IHIIDFDIGV GIQWSVFMQE LAQRWSSTMA ATPCLKISAF TSSCTHHPLE LHLIHQNLCH  960
FAGSLNIPFE FNFLSLDPFD PSVLLRRCSV VDEAIAVNLP VGWAISPPIP TLIDFVKQLS  1020
PKILVSVDHG CDRIDLPFAH HILHAFQSLT VLLDSIDAAG ANQAAAKFEQ FLVRPRVESA  1080
VLGHHCLSEK MLPWRTLFES AGFVPMHFSN FAEMQAESLL KRVLARGFHV EKHQSSLSLC  1140
WQHGELVSVS AWKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00150.1	7e-86	GRAS family protein