PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW33879.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 260aa MW: 29605.5 Da PI: 7.5722

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW33879.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.4e-19	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed++l ++v+ +G g+W++ ar+ g++Rt+k+c++rw++yl RWW33879.1 23 RGPWTVDEDLILMNYVTTHGEGRWNSLARCAGLRRTGKSCRLRWLNYL 70 89********************************************97 PP
2	Myb_DNA-binding	55.9	9.7e-18	76	119	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+++++ +lG++ W++Ia++++ gRt++++k++w++ RWW33879.1 76 RGNITPEEQLLILELHSRLGNR-WSKIAQHLP-GRTDNEIKNYWRT 119 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MELHGRPCSS ATRPSDEGMA LRRGPWTVDE DLILMNYVTT HGEGRWNSLA RCAGLRRTGK 60 SCRLRWLNYL RPDVRRGNIT PEEQLLILEL HSRLGNRWSK IAQHLPGRTD NEIKNYWRTR 120 VQKHAKQLRC DVNSKQFKDI MRYIWMPRLV ERIREASISS FAAMHQNAAA PLAPMQPVHP 180 IAQPAPANTT DSLFSSPPVS ESFTGSRETQ AGDDTAVDWM QEALLPSPGG YECPELPDLD 240 HGGWGESLWT VDDIWLQQQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	6e-82	MYB family protein