PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34061.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 564aa MW: 63164.4 Da PI: 8.7084

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.8	7.4e-18	227	311	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA+ vGFs r ++++++ + g+ + +f Cs+ gk + ++ + r++ +t+C+a++ +k++ dg +v+k leHnH++ RWW34061.1 227 EFYRDYARLVGFSARLKRTNYN-KFGQYQSVEFICSRGGKGRADDPS----YLCRPTAKTNCQATILLKLRADGLLHVKKAILEHNHPMD 311 6***************9999.5666*********9998777....8899******************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MCTIIEEERR GLSGTTSAHN RPYLCAVASH SYPLLPCTFA LASSSITIIV LAHTPVSLPL 60 TLVLFLTLFS AALPGGSGHP AGGEQQLTAG ARSAGIGLDR SLRVFLSIPA EFGPYPSPGC 120 ISCCIDVDNW GRRAESRHHS LTSMVRSDTV SWGTSESASI VLRPTFCYKI AGILLLEGMD 180 DEFAMAGALD EKTDNDDACG GDAKTNIVAD RTPTVGMKFK SYEEALEFYR DYARLVGFSA 240 RLKRTNYNKF GQYQSVEFIC SRGGKGRADD PSYLCRPTAK TNCQATILLK LRADGLLHVK 300 KAILEHNHPM DPSKIELKKR RKKMSYALPK HDENNGKIMI RRLKRFQSPF KEFQDELKAT 360 MYCNVSLVKE EVRISTYDIK ESLLLEDGNP TEHRDFRVLY SSNELEVQCC CGSFQFRGIL 420 CRHALSVLKL QQVYEIPSRY VIDRWRKDIK LLHTISYPTD EMVANNRLER YDNLLMSCLQ 480 LVEVGITSND RYHLALKMIG EVEKFLSNDK NSGNTNFMIL PSDSRTPENP ENVGVQHLVT 540 SAGNKIQNSS QIKRRGRPPK KKVV

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MCTIIEEERR GLSGTTSAHN RPYLCAVASH SYPLLPCTFA LASSSITIIV LAHTPVSLPL  60
TLVLFLTLFS AALPGGSGHP AGGEQQLTAG ARSAGIGLDR SLRVFLSIPA EFGPYPSPGC  120
ISCCIDVDNW GRRAESRHHS LTSMVRSDTV SWGTSESASI VLRPTFCYKI AGILLLEGMD  180
DEFAMAGALD EKTDNDDACG GDAKTNIVAD RTPTVGMKFK SYEEALEFYR DYARLVGFSA  240
RLKRTNYNKF GQYQSVEFIC SRGGKGRADD PSYLCRPTAK TNCQATILLK LRADGLLHVK  300
KAILEHNHPM DPSKIELKKR RKKMSYALPK HDENNGKIMI RRLKRFQSPF KEFQDELKAT  360
MYCNVSLVKE EVRISTYDIK ESLLLEDGNP TEHRDFRVLY SSNELEVQCC CGSFQFRGIL  420
CRHALSVLKL QQVYEIPSRY VIDRWRKDIK LLHTISYPTD EMVANNRLER YDNLLMSCLQ  480
LVEVGITSND RYHLALKMIG EVEKFLSNDK NSGNTNFMIL PSDSRTPENP ENVGVQHLVT  540
SAGNKIQNSS QIKRRGRPPK KKVV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	317	324	LKKRRKKM
2	318	322	KKRRK
3	318	323	KKRRKK
4	320	344	RRKKMSYALPKHDENNGKIMIRRLK
5	321	345	RRKKMSYALPKHDENNGKIMIRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	6e-23	FAR1 family protein