PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34080.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 322aa MW: 36281.3 Da PI: 8.6478

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34080.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.6	5e-17	51	96	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia+++ gR++k+c++rw++ RWW34080.1 51 RGHWRPAEDARLKELVSQYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 96 899***************************.*********996 PP
2	Myb_DNA-binding	58	2.2e-18	103	146	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++++G++ W++Iar ++ gRt++ +k++w+ RWW34080.1 103 RSAFSEEEEERLLAAHRLYGNK-WALIARLFP-GRTDNAVKNHWHV 146 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MSGEQALGFQ CLAVVKEHHE GELNSNHGEE AEGGDDTSTN ESGQQQKLCV RGHWRPAEDA 60 RLKELVSQYG PQNWNLIAEK LEGRSGKSCR LRWFNQLDPR INRSAFSEEE EERLLAAHRL 120 YGNKWALIAR LFPGRTDNAV KNHWHVIMAR KHREQSNAYR RRKASTLPSL QPPSTQALPR 180 RMKVIASINA CSGESTITST RDESASTCTD LSLNSFTSRA LPHLLNISTS PTRRLHPYAI 240 CNGIPSRKLS ASCISLQDEV FGSSLIPPLL YMQVYMTVCF LQGMDAMGNL VLTPWSCFLE 300 LIKLITLIPF LRLQQVTHWP ST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	183	RRRKASTLPSLQPPSTQALPRRMK
2	161	184	RRRKASTLPSLQPPSTQALPRRMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-70	MYB family protein