PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34289.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

YABBY

Protein Properties

Length: 172aa MW: 19238.4 Da PI: 9.0502

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	56.3	1.3e-17	1	62	1	62
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaesh 62 +d++s +eq+Cyv+C++Cnt+lav vP + ++ ++tv+CGhC +l + + +q l+ ++h RWW34289.1 1 MDLVSPTEQLCYVRCTYCNTVLAVGVPCKRMMDTITVKCGHCNHLSFLGPRPIMQSLTPTNH 62 578999************************************99977777766665555544 PP
2	YABBY	93.5	5.3e-29	83	145	101	162
YABBY 101 lsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162 s+ ++e++ + p+ v++PPek+ r+Psaynrf+keeiqrika+ Pdi hreafs+aaknWa RWW34289.1 83 SSSTSSEQMIQKPQfVMKPPEKKHRMPSAYNRFMKEEIQRIKAAKPDIPHREAFSMAAKNWAK 145 344445555555555**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MDLVSPTEQL CYVRCTYCNT VLAVGVPCKR MMDTITVKCG HCNHLSFLGP RPIMQSLTPT 60 NHHLVALQGP CTDCLRGQPS PPSSSTSSEQ MIQKPQFVMK PPEKKHRMPS AYNRFMKEEI 120 QRIKAAKPDI PHREAFSMAA KNWAKCDPRC STIVSPSDTN ELAPVPDSVK RK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	5e-50	YABBY family protein